Sulfitobacter indolifex: DSM14862_01986
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Entry
DSM14862_01986 CDS
T08028
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl03030
DNA replication
sinl03430
Mismatch repair
sinl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM14862_01986 (dnaX_1)
03430 Mismatch repair
DSM14862_01986 (dnaX_1)
03440 Homologous recombination
DSM14862_01986 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinl03032
]
DSM14862_01986 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
sinl03400
]
DSM14862_01986 (dnaX_1)
Enzymes [BR:
sinl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM14862_01986 (dnaX_1)
DNA replication proteins [BR:
sinl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM14862_01986 (dnaX_1)
DNA repair and recombination proteins [BR:
sinl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM14862_01986 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
AAA_5
NACHT
AAA_14
AAA_24
NTPase_1
DUF3772
AAA_33
AAA_25
Mg_chelatase
Pilus_CpaD
nSTAND3
AAA_2
Motif
Other DBs
NCBI-ProteinID:
UOA19196
LinkDB
All DBs
Position
cDSM14862:2011744..2012856
Genome browser
AA seq
370 aa
AA seq
DB search
MTDDAPQPDRVEGARHPRDTPKLIGQGAAEAAFLDAFNSGKLHHAWMLTGPRGVGKATLA
WRIARFLLATPDPDGGMFDLPPAETLDIDPEHPVARRVAAGAEAGLKSVTRTINPDTKRM
RKQIVVDDIRALNGFFQMSAADGGRRVVIIDDADEMNPNAANALLKMLEEPPERAILLLL
SHQPSSLLPTIRSRCRTLRLGTLNADQMAEALAGSGVEVEGDPAALAELSGGSVGGALRL
SLMGGVRTYADLVGLISSLPQMDRGRAIKLAEAAAQRGAEAKLDLLFTLLDLLLVRLART
GATGAPPAQPACPDEITVLQRLSPSPAQGRAWADAAQQISERARHGLAVNLDPAALVLDT
LRQIGQTAPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacgccccccaaccagaccgcgtggaaggtgcccgccacccgcgcgacacg
ccgaaattgatcggccaaggcgcggccgaggcggcctttcttgacgctttcaacagcggc
aaactgcaccatgcttggatgttgaccggcccgcgcggtgtgggcaaggcgacgctcgct
tggcgcattgcgcggtttctcttggccacgcctgacccagatggcgggatgtttgacctt
cccccggctgagacgctggacattgaccccgaacaccccgtcgcccgccgcgtggccgcc
ggggccgaagcggggttgaaatccgtgacccgcacgatcaaccccgacaccaagcggatg
cgcaagcagatcgtggtggacgacatccgcgcgctgaacgggttctttcaaatgtccgcc
gccgatgggggccgccgcgtggtcatcatcgacgacgccgatgagatgaaccccaacgct
gccaacgcgctcttgaagatgctcgaagagccgcccgagcgggccattctactactcctc
agccaccaaccttccagccttctgccgaccatccgctcacgctgccgcaccctgcggctc
ggcacgctaaacgcggatcagatggccgaggcgctggccgggtccggtgtggaggtcgaa
ggcgacccggcggcattggccgagctctccggcggctcggtcggcggggcgctgcggctc
tcgctgatgggcggcgtgagaacttatgccgatctcgtcggactaatctcttcgcttccg
cagatggacagagggcgtgccattaaacttgccgaagccgccgcgcaacgcggagccgag
gcaaagcttgacctgctctttaccctgctcgacctgctgctggtccgtctggcgcgcacc
ggagccactggcgcaccgcccgcgcaacccgcctgccccgatgagatcaccgtgctacag
cgcctctcccccagccccgcgcagggccgcgcatgggccgatgccgcgcagcagatatct
gagcgtgcccgccacgggctggcagtgaaccttgaccctgccgcattggtcctagatacc
ctgcggcaaataggccagacggcaccaagatag
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