Sulfitobacter indolifex: DSM14862_02224
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Entry
DSM14862_02224 CDS
T08028
Symbol
ldc_1
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl00330
Arginine and proline metabolism
sinl00480
Glutathione metabolism
sinl01100
Metabolic pathways
sinl01110
Biosynthesis of secondary metabolites
sinl04148
Efferocytosis
Module
sinl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DSM14862_02224 (ldc_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DSM14862_02224 (ldc_1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DSM14862_02224 (ldc_1)
Enzymes [BR:
sinl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DSM14862_02224 (ldc_1)
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UOA19424
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All DBs
Position
cDSM14862:complement(2255914..2257074)
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AA seq
386 aa
AA seq
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MQHTAPLSATPAAYLAKHSPDAPVLFLAPSVLQATARRFQADFDGLVTYAVKANDRPEVL
SNLVAAGITSFDVASPAEMAAVRAVCPQAVLHYNNPVRSTAEVKAGIVAGVYSWSIDDMS
ELAKLHDVPRDNEVAVRFALPVKGAAYDFGSKFGAAPAQAAALLRAVVEMGFTPSLCFHP
GTQCNDPQAWVQYVHAAADILRMADVSIKRMNIGGGFAVDRGFDAPDHRAVFAAVKAALA
ESFGAEAPTLLCEPGRAMVADAAVLATRIKGMRNEGRTVFLNDGIYGGLPDLRDMGLSGL
VDVVGPDGALRQGAPKPRVVFGPTCDSLDRLPDGLPLPEDAQTGDYLLFGGMGAYSIAMS
TAFNGYGLGRVELVSGLGDEVKRAAA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataccgcccccctttccgccacgcccgccgcctatctggcgaaacacagcccc
gacgcgccggtgctgttccttgccccttcggtgctgcaagccacggcgcggcgctttcag
gcggatttcgacgggttggtgacctatgcggtcaaagccaatgaccgacccgaggtgctg
tcgaacctcgtggcggcgggcatcaccagtttcgatgtggcttccccggccgagatggca
gcggtccgcgcggtctgtccgcaggcggtgctgcactataataaccccgtccgctcaacg
gcagaggtcaaagcagggatcgtggcgggcgtctacagttggtcgatcgatgacatgtcc
gaactggccaagctccacgacgtgccgcgcgacaatgaagtggcggtgcgctttgccctg
ccggtcaagggggcggcctatgacttcggctcgaaattcggcgcggcaccggcgcaggcg
gcagccttgctgcgtgcggtggtggagatggggttcaccccttcgctgtgtttccacccc
ggcacgcaatgcaatgacccgcaggcgtgggtgcaatatgtccatgcggcggcggacatc
ctgcggatggcggatgtctcgatcaaacggatgaacattggtggtggtttcgccgtagac
cgcggctttgatgcgccggatcaccgggcggtttttgctgcggtgaaagcggcgctggct
gagagttttggcgcggaggctccgacgctgctgtgtgaaccgggccgggcgatggtggct
gatgcggccgtattggcgacccgtatcaaggggatgcgcaatgaggggcggacggtcttc
ctcaacgacggtatctatggtggcttgcccgatctgcgggatatgggcctgtcgggtctg
gtggacgtggtcggccccgacggcgcgctgcgccaaggtgcgcctaaaccgcgcgttgtc
tttggcccaacatgcgattcgctcgaccgtttgcccgatggcctaccgctccctgaggat
gcgcagaccggcgattacctgttgttcggcggcatgggggcctattcaattgccatgtcc
acggccttcaacggctacgggctgggccgggttgagctggtctcggggcttggggatgag
gtcaagcgcgcggcggcctga
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