Sulfitobacter indolifex: DSM14862_02606
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Entry
DSM14862_02606 CDS
T08028
Symbol
ddpA_1
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM14862_02606 (ddpA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinl02000
]
DSM14862_02606 (ddpA_1)
Transporters [BR:
sinl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSM14862_02606 (ddpA_1)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SH3_5
Motif
Other DBs
NCBI-ProteinID:
UOA19795
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All DBs
Position
cDSM14862:complement(2617969..2619531)
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AA seq
520 aa
AA seq
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MLNTTKLTAAVLALAMAGPLAAQDGAPKSGGTLNVVIQPEPPSLMLGLVQNGPTQMVGGD
IYESLLRYDFDLKPEGQLAESWEISEDGKTYTFKLREGVVFHDGEPFTSADVEFSMDKFL
RESHSRMRTYMEHVESIETPDDHTVVFNLKQPFGPFIGIFEPGTAPMIPKHIYEGTDFAN
NEANNTPIGTGPFKFDKWEKGSFIHLVKNDDYYMEGKPYVDEVYYHVIPDAASRAVAYET
GKVDVLPGGSVENFDVARIQAMDNTCITDKGWEYFGPLSWMWVNNDNKPLDDVKVRKAIM
HGIDRQFAKDALWNGLGKVSTGPLSSSTRFYDGETPDITFDPEKAKTLLEESSYDGETIR
ILGLPYGETWQRWAEAVKQNLSEIGMTTEIVPSDVAGWNQKVADRDFDLAFTYLYQYGDP
ALGVSRTYMGDNAAPGSPWNNVANYQNAETDKLFAEAALMASPEERKAAYKEIQDKIVED
VPNIWLLELGFPTIYRCDVKNPVNTAFGVNDGFRDVWIDK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacaccactaaattaacggcagccgttttggcgctggcgatggccggaccactc
gcggcgcaagacggcgcacccaaatccggcggcacgctgaacgttgtgatccagccagaa
ccgcccagcttgatgctcggcctcgtgcagaacggcccaacgcagatggtcggcggcgat
atctatgaaagcctgctgcgttatgatttcgatctgaagcccgaaggccaattggctgaa
tcttgggagatttcagaagacggcaagacctataccttcaaactccgcgaaggcgtggtt
ttccatgacggagagccgtttacctcggcggatgttgaattctccatggataagttcctg
cgcgaaagccactcgcggatgcgcacctatatggagcatgtcgagagcatcgagacgcct
gatgaccacacggtcgtgttcaacctaaagcagcccttcggccccttcatcggtatcttt
gagcccggcaccgcgccgatgatcccaaaacacatctatgagggcacggatttcgccaac
aatgaggcgaacaacacgcctatcggcaccggccccttcaagttcgacaaatgggaaaag
ggcagcttcatccatctggtcaagaacgacgactactacatggagggcaaaccctatgtg
gacgaagtctattaccacgtgatccccgacgcggcgtcgcgcgccgtggcttatgagacc
ggcaaagttgatgtgctgcccggcggctcggtcgaaaacttcgatgtggcgcgtattcag
gcgatggacaacacctgcatcaccgacaaaggctgggaatactttggcccgctgtcttgg
atgtgggtgaacaacgacaacaagccgctcgacgatgtgaaggtgcgcaaggcgatcatg
catggcatcgaccgtcagttcgccaaggacgcgctttggaatgggttgggcaaggtctcg
accgggccgctgtcgtcctccaccaggttctatgacggtgagacaccggacatcaccttt
gacccagagaaagccaaaaccctgctggaagaaagcagctatgacggcgaaaccatccgc
attcttggtctgccctacggtgagacttggcagcgctgggccgaagcggtcaaacaaaac
ctgagcgagatcggcatgacgaccgagatcgtgccctcggacgtggcgggttggaaccag
aaggtcgcggaccgcgactttgatctcgcctttacctacctctaccaatacggcgacccg
gcacttggtgtttcgcggacctatatgggcgacaatgccgctcccggttcgccttggaac
aacgtggcgaattatcaaaacgctgagacggacaagctgttcgccgaagcggcgctgatg
gccagccccgaagagcgcaaggcggcatacaaggaaatccaagacaaaatcgtcgaggac
gtgccgaacatctggctcttggaactgggcttccccacgatctaccgctgtgacgtcaaa
aaccccgtcaacaccgcctttggggtgaacgacgggttccgcgacgtttggatcgacaaa
taa
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