Sulfitobacter indolifex: DSM14862_02610
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Entry
DSM14862_02610 CDS
T08028
Symbol
ylmB
Name
(GenBank) N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase
KO
K01438
acetylornithine deacetylase [EC:
3.5.1.16
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl00220
Arginine biosynthesis
sinl01100
Metabolic pathways
sinl01110
Biosynthesis of secondary metabolites
sinl01210
2-Oxocarboxylic acid metabolism
sinl01230
Biosynthesis of amino acids
Module
sinl_M00028
Ornithine biosynthesis, glutamate => ornithine
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
DSM14862_02610 (ylmB)
Enzymes [BR:
sinl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.16 acetylornithine deacetylase
DSM14862_02610 (ylmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DdrO_C
Motif
Other DBs
NCBI-ProteinID:
UOA19799
LinkDB
All DBs
Position
cDSM14862:2623032..2624321
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AA seq
429 aa
AA seq
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MTLDPDLKSRILQAVEDGFAEQVSFTQQLVQTPSQRGQEHAIQDLLFRGLQSRGYAMDRF
KMDRAAIEAHPGGSKYSDDHSDAPIVVGIHRPRDETGRSLILQSHLDVVPEGLHDMWDDP
PLSAKIDGDWMYGRGAGDMKAGAAANIFALDALRRIGLQPAATVYVQSVVEEESTGNGAL
QTFLQGYTADAVFIPEPEEEMLVRTNTGVIWFQVQVRGVPVHVREMGEGANAIDAATRVM
TALREMEEDWNAEKGEHPHFEDEAHPINLNIGKIEGGDWASSVPSWCNIDCRVSIYPGRS
AEDAAREITERVKAFAQTDSFLSNNPPEVVFNGFHAEGYVLEPGSDAEAVLERAHESAIG
APLQSFMTAGYLDTRVYALYNKIPALCYGPKSRNIHGINESVSLSSVKKITQAMALFIAE
WCGTEDITP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgatcctgatctgaaatcccgcatccttcaggctgttgaagatgggtttgcc
gagcaagtgagctttacccagcagctggtgcagaccccttcccagcgcggccaagaacat
gcgatccaagacctgctgtttcgcggcttgcagagccgtggctatgcgatggatcgcttc
aaaatggaccgcgccgcgattgaggcgcaccccggcggctcgaaatattccgacgatcac
tccgacgcgcccatcgttgtcggcatccaccgcccgcgcgatgagacgggccgctcgctg
atcctgcaatcgcatctcgatgtggtccccgaagggctgcacgacatgtgggatgacccg
cccctgtcggccaagatcgacggcgattggatgtatggccgcggcgcaggcgacatgaag
gcgggtgctgcggcgaatatctttgccctagacgcgctgcgccgcattgggctgcaacca
gcggcgaccgtctatgtgcaatccgtggtggaggaggaatccactggcaacggcgcgttg
cagaccttcctacaaggctacaccgccgatgcggtttttatccccgagccggaggaagag
atgctggtgcgcaccaacaccggcgtcatctggtttcaggtgcaggtgcgtggcgtaccc
gtccatgtgcgcgaaatgggcgaaggggccaatgcgattgatgcggccacccgggttatg
accgccctgcgcgagatggaggaagactggaacgccgagaaaggcgagcacccgcatttc
gaagacgaagcgcatccgatcaacctcaacatcggtaagatcgaaggcggcgattgggcg
tcctccgtgccgtcatggtgcaacatcgactgccgcgtttccatctatccgggccgcagc
gcggaggacgccgcacgcgagatcaccgagcgggtcaaagcctttgcccagaccgacagc
ttcctgtccaacaacccgcccgaagtggtctttaacggctttcacgctgaaggctatgtg
ctggagcccggcagcgatgccgaagccgtgctggaacgcgcccatgaaagtgccatcggc
gcgccgttgcagtcgtttatgacagcgggctatctcgatacgcgggtctatgcgctttac
aacaagatccccgcactctgctacgggccaaaatcgcgcaacatccatgggatcaacgag
tccgtcagtctcagttcggtcaaaaaaattacccaagccatggcgctgttcatcgccgaa
tggtgcgggaccgaggacatcaccccatga
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