Sulfitobacter indolifex: DSM14862_03072
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Entry
DSM14862_03072 CDS
T08028
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sinl
Sulfitobacter indolifex
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DSM14862_03072 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinl03019
]
DSM14862_03072 (rnc)
03009 Ribosome biogenesis [BR:
sinl03009
]
DSM14862_03072 (rnc)
03036 Chromosome and associated proteins [BR:
sinl03036
]
DSM14862_03072 (rnc)
Enzymes [BR:
sinl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DSM14862_03072 (rnc)
Messenger RNA biogenesis [BR:
sinl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSM14862_03072 (rnc)
Ribosome biogenesis [BR:
sinl03009
]
Eukaryotic type
90S particles
RNase
DSM14862_03072 (rnc)
Prokaryotic type
rRNA processing factors
DSM14862_03072 (rnc)
Chromosome and associated proteins [BR:
sinl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DSM14862_03072 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UOA20242
LinkDB
All DBs
Position
cDSM14862:complement(3086114..3086800)
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AA seq
228 aa
AA seq
DB search
MKLSGDLKAFEARIGHSFAKPELLVRAVTHASMSSANRDDNQRLEFLGDRVLGLVMAEAL
LALDPGATEGQLAPRFNALVRKETCADVAREIDLGKVLKLGRSEMISGGRRKQALLGDAI
EAVIAAVYLDSGFEAAKGLVLRLWGDRLKTVKEDARDAKTALQEWAQARGLMPPRYVQTD
RSGPDHAPVFTITARLDNGAEAAATAPSKRAAEQAAATTLLRQLEKNT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttagcggtgacctaaaagcctttgaggcgcggatcggccatagtttcgccaag
ccggaactgctggtccgtgccgtgacacatgcctccatgtcctcggccaaccgcgatgac
aatcagcggttggagtttctgggcgaccgggtgttggggcttgtgatggccgaggcgctg
ctggcgcttgatcccggtgccaccgaaggccagttggccccgcgtttcaacgcgctggtg
cgcaaggaaacctgcgctgacgtggcgcgtgagattgatctgggcaaggtgctgaagctg
gggcggtcagagatgatctcgggcgggcggcgcaaacaggcacttttaggcgatgccatt
gaggcagtgatcgccgctgtctatctcgatagcggttttgaggctgcaaaggggttggtt
ttgcggctatggggtgaccggctcaaaaccgttaaggaagacgcgcgtgacgccaaaacc
gcgttgcaggaatgggcgcaggcgcgcgggctaatgccgccgcgttacgtgcagaccgac
cgaagcggccccgatcacgcacctgtctttacgattaccgcgcggctggacaacggggcc
gaagccgccgccaccgccccctcaaaacgcgccgccgaacaggccgccgccaccacgctg
ctgcggcaattggagaaaaatacatga
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