Sulfitobacter indolifex: DSM14862_03123
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Entry
DSM14862_03123 CDS
T08028
Symbol
rppH_2
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM14862_03123 (rppH_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinl03019
]
DSM14862_03123 (rppH_2)
Messenger RNA biogenesis [BR:
sinl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DSM14862_03123 (rppH_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
UOA20293
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All DBs
Position
cDSM14862:complement(3136700..3137182)
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AA seq
160 aa
AA seq
DB search
MTPEEIAKLPYRPCVGVMLVNADGKVFVGQRRDRNQDAWQMPQGGVDKGEAARDAALREL
EEETGIPRDLVEVEAETSSWLPYDLPHELVPNIWKGRYRGQEQKWFLMRFLGQDAQVNIA
TAEPEFSEWCWMPADQLVANIVPFKRAVYAAVLKEFEEKL
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaagagattgccaaactgccctaccgcccttgcgtcggcgtcatgttggtg
aacgccgatggcaaagtctttgtcggccagcggcgcgaccggaatcaggatgcgtggcag
atgccccaaggcggggtggataagggagaggctgcacgtgatgcggccctgcgcgagttg
gaggaagagaccggcatcccccgcgatctggtagaggtcgaggccgagacctcaagctgg
ctgccctacgacctgccgcatgaactggtgcccaacatctggaaggggcggtatcggggg
caggaacagaaatggttcctcatgcgttttcttgggcaggacgctcaggtgaatatcgcc
accgctgagcctgagttctcggaatggtgctggatgcccgcagatcaactggtcgcgaac
atcgtaccgttcaaacgcgcggtctatgcggcggttcttaaagagtttgaggagaagtta
tga
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