Sulfitobacter indolifex: DSM14862_03153
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Entry
DSM14862_03153 CDS
T08028
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM14862_03153 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinl03019
]
DSM14862_03153 (recQ_2)
03400 DNA repair and recombination proteins [BR:
sinl03400
]
DSM14862_03153 (recQ_2)
Enzymes [BR:
sinl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM14862_03153 (recQ_2)
Messenger RNA biogenesis [BR:
sinl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM14862_03153 (recQ_2)
DNA repair and recombination proteins [BR:
sinl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSM14862_03153 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOA20323
LinkDB
All DBs
Position
cDSM14862:complement(3169251..3171296)
Genome browser
AA seq
681 aa
AA seq
DB search
MTGAATLLRDVFGFDGFRPGQQEIVEAVTEGENVLAIMPTGGGKSLCFQLPALMREGVTV
VISPLIALMRDQVRSLQEAGVAAGALTSGNTPEETDAVWEALEAGTLKLLYMAPERLAAG
SAMGMLRRVGVNLIAVDEAHCVSQWGHDFRPDYLRIGELRRTLNVPLAAFTATADAETQV
EIVEKLFDGTPPRAFLRGFDRPNIHLAFAAKNKPRDQILNFAAARKGQSGIVYCGTRAKT
EGLAKALRDQGQTALHYHGGMEAEDRRIAERRFQQEDGLIVCATVAFGMGIDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLYGPDDIRLRRSQIDEGLAPPERRAADHGRL
NALLGLAEALECRRKTLLGYFDETEITCGRCDLCDSPADVFDGTTAVRKALSAMLRTDEW
FGAGHLIDILLGNETDKVRLRGHQSLPTYGVGGEYSRNEWQAVFRQMMGHDLVRPDAERH
GALRMTDAALPILRGEAAINLRRDTIKAAGAIRRPAVKAMVSDEDAPLLSALKAKRRALA
EAARVPAYIIFTDRTLIEMAEARPQNLDAMARIGGVGAKKLETYGAAFLEVINGEAQPMH
KARRKLAGREAGNVYDQLLQVQADLARGEQGTEKPLSCSAAMLAKVAQLRSADSSAIERL
LGDKRAERFGPAFLDVLRDAG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgctgccacgcttcttcgtgacgtattcggttttgacgggttccgccccggc
cagcaagagatcgttgaggcggtcactgagggcgagaacgtgctcgccatcatgccaacg
ggcggcggtaaatccctgtgtttccaactgcctgcgctgatgcgcgagggggtgaccgtg
gtcatcagcccgctcattgcgctgatgcgcgatcaggtgcgcagcttgcaagaagcgggc
gtcgcggcgggtgcgctgacctctggcaacacacccgaagagaccgacgcggtttgggaa
gcgctggaggcaggcacgctcaaactgctctacatggcccccgaacggctcgccgcgggc
tcggccatgggcatgttgcggcgtgtgggcgttaatcttattgccgtggacgaggcgcat
tgcgtcagccaatggggccatgatttccgccccgactacctgcgcatcggtgaattgcgc
cgcacgctgaacgtgccgcttgccgccttcaccgccactgcagacgctgaaacgcaagtg
gagattgtcgagaaactgttcgacggcaccccgccacgcgccttcttgcgcgggtttgac
cggcccaacatccacctcgcctttgccgctaaaaacaagccgcgcgatcagatcctgaac
ttcgccgccgcgcgcaagggccagtcgggcatcgtctattgcggcacgcgggcaaagacc
gaagggctggccaaagcgctgcgcgatcaggggcaaaccgcgctgcactatcacggcgga
atggaagccgaagatcgccgcatcgccgagcggcggtttcagcaagaagacgggttgatc
gtctgcgccacggtggcctttggcatggggattgataaaccggatatccgctgggtggct
cacgcggatttgcccaagtcgattgaggcctactatcaagagattggccgtgccggacgt
gatggtgccccggcggaaacgctgacgctttatggcccggacgacattcgcctgcgccgc
agtcagatcgacgaggggcttgccccgcccgaacgccgcgccgcagatcacgggcgattg
aacgcgcttttggggctggccgaagcgctggaatgccgccgcaaaaccttgctgggctat
ttcgacgagactgaaatcacctgtggccgctgcgacctctgcgacagcccggcggatgtg
ttcgacggcaccacagcggtgcgcaaggcgctgtcggcgatgctgcgcaccgatgaatgg
tttggcgcggggcatttgattgacatcctgcttggcaatgaaaccgataaggtgcgcctg
cgcgggcatcaatctttgccgacctatggcgtgggtggcgaatacagccgcaatgaatgg
caggcggtgtttcggcaaatgatgggccatgacctcgtgcgccccgatgccgaacgccat
ggcgcactgcgcatgaccgatgcggccctgccgatcctgcgcggcgaagcagcaatcaac
ctgcgccgcgacacgatcaaggcggcgggggccattcggcggccagcggttaaggcgatg
gtcagcgatgaggatgcaccgctgctctcggcgctcaaggccaaacgccgtgcgttggcc
gaagcggcgcgcgtgcctgcctatatcatcttcaccgatcgcaccctgattgagatggcc
gaggcgcgaccgcaaaaccttgatgcgatggcgcgcatcggcggggtcggcgcgaaaaag
cttgagacctacggcgcggcctttcttgaggtgatcaacggcgaggcacagcccatgcat
aaggcccggcgcaagctggcggggcgcgaggcgggcaatgtctatgaccagttgttgcag
gtgcaggccgatctggcgcgcggcgagcagggcaccgaaaaaccgctgagttgttctgcg
gcgatgctggcaaaggtggcgcaactgcgcagcgctgacagttctgccattgagcggctc
ttgggcgacaaacgcgccgaacgcttcggccccgcctttctggacgttctgcgcgacgcg
ggctag
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