Streptomyces incarnatus: ABB07_03870
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Entry
ABB07_03870 CDS
T09785
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABB07_03870 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sinn01007
]
ABB07_03870 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinn03016
]
ABB07_03870 (lysS)
Enzymes [BR:
sinn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ABB07_03870 (lysS)
Amino acid related enzymes [BR:
sinn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABB07_03870 (lysS)
Transfer RNA biogenesis [BR:
sinn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABB07_03870 (lysS)
Prokaryotic type
Other AARSs
ABB07_03870 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AKJ09190
LinkDB
All DBs
Position
complement(895598..898876)
Genome browser
AA seq
1092 aa
AA seq
DB search
MTASAESAARRDPTAPVRPPAGGRLGWVPEAFGALFAALGLLCALLALVEPLRRLLRPVA
HALDLVLLPISANLAYAVFLFLLAGATAARKKVAWWLVVVYLGLVVLTDAIGVGLGLYAQ
SLPSLVLCGLLLLLLVVARKEFYAASRRGAVWRALAVLLAGLAVAILLGWGLVMLFPGTL
PANEHLAWAADRVCGGLVSGSSFSGRPPRKVTFVLGLLGALALLNAAAALFRSQRLEAAL
HDDEEARIRALLAAYGERDSLGYFATRRDKAVVFSPSGKAAVTYRVEAGVCLASGDPVGD
MEAWPHAIAAWLDVARRYAWAPAVMGASEDGARAYARAGLGALQLGDEAIVQVAAFDLNG
RDMRVTRQAVHRVRRTGATCRIRRHATLTEREMEEIVDKADAWRDTETERGFSMALDRLG
DPADGDCLLVEALGEDGRLLALLSFVPWGRSGVSLDLMRRDRAAPNGVMEFMVAELCAAA
PKLGVRRISLNFAVFRSVFEEGARIGAGPVLRIWRRLLLFFSRWWQLEALYRSNAKYHPE
WYPRFICYGDTAALARIGLASGIAEGFVSVPSLRKLWGKGHPKAGQRPATTHGLPPLTAL
GLAGGDQAGPAPPDAGLPEQVRVRYHKLDRLRAAGTDPYPVGVPAPTHALADVPPGEDVT
VAGRLMLVRDFGGIVFAVLRDWSGDHQIALTRDRSGAALDRFTAGCDIGDHLTATGRTGL
SDKGEPTVFVTSWQLTGKCLRPLPDKRRGLTDPEARVRRRYLDLATSPAARAVIRARSAA
VQALRQGLLDRGFVEVETPMLQPVHGGATARPFTTHINAYDLDLYLRIAPELYLKRLCVG
GLEKVFELGRTFRNEGVSYKHNPEFTMLEAYQAHADYDVMLDLTRELIQGAARAAFGSPV
ARKDGEEYDISGKWPVRTVYGAISEALGEEIGPGTELLRLHRLCDRAGVPYTADDRPGDI
VLEMYERLVEERTGLPTFYKDFPTDVSPLTRQHRTDPRLAERWDLVAFGTELGTAYSELT
DPVEQRRRLTEQSLLAAGGDPEAMELDEDFLQALEYAMPPTGGLGIGVDRLVMFLTGLTI
RETLPFPLVRHR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccagcgcggagtccgccgcacggagggatcccacggccccggtacgtccgccc
gccggtggacgcctcggctgggtgcccgaggccttcggggcgctcttcgccgcgctcggg
ctgctgtgcgccctgctcgcgctcgtcgaaccgctgcgccgcctgctccgcccggtcgcg
cacgccctcgacctggtgctccttcccatcagcgccaacctggcctacgccgtcttcctg
ttcctgctggccggtgccaccgccgcccgcaagaaggtcgcctggtggctggtcgtcgtc
tatctgggcctggtcgtcctcaccgacgcgatcggcgtgggcctcggcctgtacgcccag
tcgctgccgtcgctggtgctgtgcggcctgctgctgctcctgctcgtcgtggccagaaag
gagttctacgccgcctcccggcgcggtgccgtgtggcgggcgctcgccgtgctgctggcc
gggctcgccgtggccatcctgctgggctggggcctggtcatgctcttcccgggcacgctg
ccggcgaacgagcacctggcctgggcggccgaccgggtgtgcggcggcctggtctcgggc
agctccttctccggccgcccgccccgcaaggtcaccttcgtgctcggcctgctcggcgcc
ctcgccctgctcaacgccgccgccgcgctgttccgctcccagcgcctggaggccgccctg
cacgacgacgaggaggcccgcatccgcgccctgctggccgcctacggcgaacgggactcc
ctcggctacttcgccacccgccgcgacaaggccgtggtcttctcgcccagcggcaaggcc
gccgtcacctaccgcgtcgaggccggcgtctgcctggccagcggcgaccccgtcggcgac
atggaggcctggccgcacgccatcgccgcctggctggacgtggcccgccgctacgcctgg
gcgccggccgtcatgggcgcctccgaggacggcgcccgcgcctacgcccgcgccggactc
ggcgccctccagctcggcgacgaggcgatcgtgcaggtggccgccttcgatctgaacggc
cgggacatgcgcgtgacccggcaggccgtgcaccgggtccgccgtaccggcgccacctgc
cgcatccgccggcacgccaccctcaccgaacgggagatggaggagatcgtcgacaaggcc
gacgcctggcgcgacaccgagaccgagcgcggcttctccatggccctggaccggctcggc
gaccccgccgacggcgactgcctgctggtggaggccctcggcgaggacggccggctcctc
gccctgctctccttcgtgccctggggccggagcggcgtctccctggacctgatgcgccgt
gaccgggccgcccccaacggggtcatggagttcatggtcgccgaactgtgcgccgccgcc
cccaagctgggcgtccgccggatctcgctgaacttcgcggtcttccggtcggtcttcgag
gagggcgcccgcatcggcgccggccccgtcctcaggatctggcgccgcctgctgctgttc
ttctcccgctggtggcagctggaggccctgtaccgctccaacgccaagtaccacccggag
tggtacccgcgcttcatctgctacggcgacaccgccgccctcgcccgcatcggcctggcc
tccggcatcgccgaaggcttcgtctccgtaccgtcgttgcgcaaactctggggaaagggg
cacccgaaggccgggcagcggcccgcgaccacccacgggctgccgcccctgacggcgctc
ggcctcgccggaggggaccaggccgggcccgcacccccggacgcgggtctgcccgagcag
gtccgcgtccggtaccacaagctcgaccggctgcgcgccgccggcaccgatccctacccg
gtcggcgtccccgcccccacccacgccctcgccgacgtgccccccggcgaggacgtcacc
gtcgccggacggctcatgctggtccgcgacttcggcggcatcgtcttcgccgtgctgcgc
gactggtccggcgaccaccagatcgccctcacccgcgaccgctccggcgccgccctcgac
cgcttcaccgccggatgcgacatcggcgaccacctcaccgcgaccggccgcaccgggctc
agcgacaagggcgagcccacggtcttcgtcacctcctggcagctcaccggcaagtgcctg
cgcccgctgcccgacaaacgccgcggcctcaccgaccccgaggcgagagtccgccgccgc
tacctcgacctggccaccagtcccgccgcccgcgcggtgatccgggcccgctccgccgcc
gtgcaggccctgcgccagggcctgctggaccgcggcttcgtggaggtcgagacgccgatg
ctccagccggtccacggcggcgccaccgcccgacccttcaccacccacatcaacgcctac
gacctcgacctgtacctgcgcatcgcccccgagctgtacctgaagcggctgtgcgtcggc
ggcttggagaaggtcttcgaactgggccgcaccttccgcaacgagggtgtgtcctacaag
cacaaccccgagttcacgatgctggaggcgtaccaggcccacgccgactacgacgtcatg
ctcgacctcacccgcgagctgatccagggcgcggcgcgggccgccttcggctccccggtg
gcccgcaaggacggggaagagtacgacatctccgggaagtggccggtcagaacggtctac
ggcgcgatctccgaggcgctgggggaggagatcggccccggcaccgagctgctgcggctg
caccggctgtgcgaccgggccggggtgccctacaccgccgacgaccggcccggcgacatc
gtcctggagatgtacgagcggctcgtcgaggagcgcaccgggctccccaccttctacaag
gacttccccaccgacgtctccccgctgacccgccagcaccgcaccgacccgcggctcgcc
gagcgctgggacctcgtcgccttcggcaccgaactcggcaccgcctactcggagttgacc
gacccggtggaacagcgccggcggctcaccgagcagtcgctgctggccgccggcggcgac
ccggaggccatggagctggacgaggacttcctccaggccctcgagtacgcgatgcccccg
accggcggcctcggcatcggcgtcgaccggctcgtgatgttcctcaccggcctgacgatc
cgggagaccctgccgttccccctggtgcgccaccgctga
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