Streptomyces incarnatus: ABB07_06520
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Entry
ABB07_06520 CDS
T09785
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABB07_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sinn03000
]
ABB07_06520
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_06520
Enzymes [BR:
sinn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ABB07_06520
Transcription factors [BR:
sinn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ABB07_06520
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABB07_06520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AKJ09686
UniProt:
A0ABN4G7M7
LinkDB
All DBs
Position
complement(1495547..1497025)
Genome browser
AA seq
492 aa
AA seq
DB search
MQTATHLDREHCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFYPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGVVDREGVPGLAGRLGYSTRQ
VERQLLAELGAGPLALARAQRAQTARLLIETTALPMAEVAFAAGFSSIRAFNDTVREVFA
LTPSELRARAPRSGAGTPGVLSLRLPFRAPLNPSNLFGHLAATAVPGVEEWRDSAYRRTL
RLPYGHGIVSLTPCPDHIACRLTLSDLRDLPVAISRCRRMLDLDADPVAVDDRLRTDPLL
APLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGKPLDDPEGGLTH
LFPSAEALAAVDPGSLAMPRTRRTTFTTLVRELAEGTLHLGVESDWAETRARLLSLPGFG
PWTVDVIAMRALGDPDAFLPTDLGIRRAAQELGLPSTPAALTARAEAWRPWRAYAVQYLW
ATDGPPINFLPV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagcgacccacctcgaccgggagcactgcgtacgcgccgtgcagtccaaggac
gcgcggttcgacgggtggttcttcacggccgtcctgaccacccggatctactgccggccc
agctgtcccgtcgtcccgcccaagccggagaacatgaccttctacccgagcgcggccgcc
tgccagcaggccgggttccgggcctgcaagcgctgccgccccgacaccagccccggttcc
ccggagtggaaccagcgcgccgacctggtggcccgcgcgatgcggctcatcgccgacggt
gtcgtggaccgcgagggcgtgcccggactcgccggccggctcggctacagcacccgccag
gtggagcggcagctgctcgccgaactcggcgcgggcccgctcgcgctcgcccgcgcccag
cgcgcccagaccgcacggctgctcatcgagaccaccgcgctgcccatggcggaggtcgcc
ttcgcggccggcttctcctccatccgcgccttcaacgacacggtccgcgaggtcttcgcc
ctgaccccgagcgagctgcgcgcccgcgcgccgaggtccggggccggtacgccgggcgtg
ctgagcctgcggctgccgttccgcgccccgctgaacccctccaacctcttcggccacctc
gccgccaccgccgtacccggtgtcgaggagtggcgcgacagcgcgtaccggcgcacgctg
cgcctgccgtacggccacgggatcgtctccctgacgccgtgccccgaccacatcgcctgc
cgcctcaccctcagcgatctgcgtgacctgcccgtggcgatcagccgctgccgccgcatg
ctcgacctggacgccgaccccgtcgccgtcgacgaccggctgcgcacggatccgctgctc
gcgccgctggtcgacaaggcgcccggccgccgggtgccgcgcacggtcgacgaggccgag
ttcgccgtccgcgcggtcctcggccagcaggtctccacggccgccgcccgcacccacgcg
gcccgtctggtcaccgcgcacggcaagcccctcgacgaccccgagggcggcctcacgcac
ctcttcccgtccgccgaagccctcgccgccgtggaccccgggagcctggcgatgccgcgc
acccggcgcaccaccttcaccaccctggtccgcgaactcgccgagggcacactgcacttg
ggagtcgagtccgactgggcggaaacccgcgcccggctcctctccctgcccgggttcggg
ccgtggacggtcgacgtcatcgccatgcgcgccctcggcgaccccgacgccttcctcccc
accgacctcggcattcggcgtgcggcacaggagctgggcctgccctccaccccggccgcg
ctcaccgcccgagcggaggcatggcggccctggcgggcgtacgccgtgcagtacctgtgg
gcgaccgacggccccccgatcaacttcctgcccgtgtaa
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