Streptomyces incarnatus: ABB07_08300
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Entry
ABB07_08300 CDS
T09785
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sinn
Streptomyces incarnatus
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinn03016
]
ABB07_08300
Enzymes [BR:
sinn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ABB07_08300
Transfer RNA biogenesis [BR:
sinn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ABB07_08300
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AKJ10023
LinkDB
All DBs
Position
1907865..1909154
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AA seq
429 aa
AA seq
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MTDAQDTAADSTRRSSGGTPPDDAGSSVLGAPTPLLEPREGIPPVVADVGGLAEVVAAFA
AGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSKLGDVLSGVEWVLH
AATQDLPCLREIGMVPTRLFDTELAGRLAGFPRVGLGAMVENVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWALQEFDAIAAAPPAEPRKDPWRRT
SGMHKVRRRRQLGVVRELWETRDRIARKRDVSPGKVLSDAAIVEAALALPAGVHALAALN
GFGHRMGRRQLEQWQAAVDRAKALPESALPQPGQPVTGPPPPRAWADKDPAAAARLSAAR
AGVTALAERLNMPQENVVSPDTVRRICWEPPKVVDTGSVERALAGYGARAWQVELVAPVL
VSALSAKGD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagacaccgcagcagacagcacccggcgcagctccggaggcacccct
ccggacgacgccggatcttctgtactgggggcgccgacaccgctgctcgaaccccgcgag
ggcattccgcccgtcgtcgccgacgtcggcgggctcgccgaggtggtcgccgccttcgcc
gcgggctccggcccggtcgccgtcgacgccgagcgcgcctccggctaccgctacggccag
cgcgcctacctcgtgcagctgcgccgcgagggcgccggaaccgcgctgatcgaccccgtg
gcctgccccgacctgtccaagctcggcgatgtgctctccggcgtcgagtgggtactgcac
gccgccacccaggacctgccctgcctgcgcgaaataggcatggtgccgacccggctgttc
gacaccgagctggccggccggctcgccgggttcccccgggtcggcctcggcgccatggtc
gagaacgtgctcggcttcgtcctggagaagggccactccgccgtcgactggtcgacccgg
ccgctccccgagccgtggctccggtacgccgcgctcgacgtggaactcctcgtcgacctg
cgcgacgccctggagaaggagctggaccggcagggcaagctggagtgggccctgcaggag
ttcgacgcgatcgcggcggcgccgccggccgagccgaggaaggacccgtggcgtcgtacg
tccgggatgcacaaggtgcgcaggcgccggcagctcggtgtcgtgcgggagctgtgggag
acgcgggaccggatcgcgcggaagcgggacgtgtcaccgggcaaggtcctcagtgacgcc
gccatcgtggaggcggcgctcgctcttccggccggcgtccacgcgctcgccgcgctgaac
gggttcgggcaccggatggggcggcggcagctggagcagtggcaggcggcggtcgaccgg
gccaaggccctgccggagtccgcgctgccgcagccgggtcagccggtgacggggcctccg
ccgccgcgggcctgggccgacaaggatcccgccgccgcggcacggctgtccgcggcacgg
gcgggggtcaccgcgctcgccgagcggctcaacatgccccaggagaacgtggtgtccccg
gacaccgtgcgacgcatctgctgggagccgccgaaggtggtggacaccgggtccgtggag
cgtgccctcgcggggtacggcgcgcgcgcgtggcaggtggaactggtggcgccggtgctg
gtgagcgcgctgtcggcgaagggggactga
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