Streptomyces incarnatus: ABB07_12590
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Entry
ABB07_12590 CDS
T09785
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ABB07_12590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_12590
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ABB07_12590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
YebG
Motif
Other DBs
NCBI-ProteinID:
AKJ10820
LinkDB
All DBs
Position
complement(2902480..2903547)
Genome browser
AA seq
355 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLVNATESHAISFRQIHTEDNGRIRYRKVCELEEREVTQSEI
GKGYEDADGTIIPITDDDLSHLPIPTARTIEIVAFVPADRIDPLQMDAAYYLAASGAPAA
KPYTLLREALKRSNKVAIAKYALRGRERLGMLRVVGDAIAMHGLLWPDEVRAPEGVAPDA
HVTIRDKELDLADALMDTLGEVDLEDLHDEYREALEEVIAAKASGEAPPEAPAPAAAGKV
LDLMAALENSVRAARESRGEPVPSGGPAEVRPLPGRAAPKAAGGKKSTSTAKKTATAKKP
EPARKSTSGTASKAAQGAKKTTTAKTATARTTAAAKTTAGKKTAAKKTASRKRTA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatatggaacggcgccatctccttcgggctcgtcagcatcccgatcaagctg
gtgaacgccacggagagccacgcgatctcctttcgccagatccacaccgaggacaacggc
cgcatccgctaccgcaaggtgtgtgaactggaggaacgcgaggtcacccagtcggagatc
ggcaaggggtacgaggacgccgacggcacgatcatcccgatcaccgacgacgacctctcc
cacctccccatccccacggcccggacgatcgagatcgtggccttcgtgccggccgaccgg
atcgacccgctccagatggacgcggcgtactacctggccgcctccggcgccccggcggcc
aagccgtacaccctgctgcgcgaggccctgaaacgcagcaacaaggtcgcgatcgccaag
tacgccctgcgtggccgcgaacgcctcggcatgctccgggtggtcggcgacgccatcgcc
atgcacggcctgctctggccggacgaggtccgcgcccccgagggcgtcgcccccgacgcc
cacgtgaccatccgcgacaaggaactcgacctcgcggacgccctgatggacaccctcggc
gaggtcgacctggaagacctccacgacgagtaccgggaggccctggaggaggtcatcgcc
gcgaaggcctccggcgaggcacccccggaggccccggccccggccgccgcgggcaaggtg
ctggacctgatggccgccctggagaacagcgtccgcgcggcccgcgaatcccgcggcgaa
ccggtaccctccggcggcccggcagaggtcagacccctgccgggcagggccgcacccaag
gctgcgggcggcaagaagtcgacgtcgacggcgaagaagacggccacggcgaagaagccg
gaaccggcccggaagtccacgtccgggacggcatccaaggcggcacagggggcgaagaag
accacgacggccaagacggcgacggccaggacgacggcggcggccaagacgacggcgggg
aagaagacggcggcgaagaagacggcgtcgcgcaagcggacggcttga
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