Streptomyces incarnatus: ABB07_13185
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Entry
ABB07_13185 CDS
T09785
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03420
Nucleotide excision repair
sinn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABB07_13185
03430 Mismatch repair
ABB07_13185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_13185
Enzymes [BR:
sinn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABB07_13185
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABB07_13185
MMR (mismatch excision repair)
Other MMR factors
ABB07_13185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Viral_helicase1
C1_1
Zn_ribbon_TiaS
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AKJ10935
LinkDB
All DBs
Position
complement(3029180..3031318)
Genome browser
AA seq
712 aa
AA seq
DB search
MLEGLDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILQPSSVLAVTFTNR
AAGEMRGRLRQLGAHGVQARTFHSAALRQLHYFWPKAIGGGMPRLVDRKIQLVADAAASL
GTRLDRGELRDVTAEIEWSKVTQTIPADYPYAAAKAGREAPRDATEIAHLYAAYEDLKRD
RAVIDFEDVLLLTVAILQDRHDIADQVRAQYQHFVVDEYQDVSPLQQRLLELWLGDRDDL
CVVGDASQTIYSFTGATPDHLLDFRTRHPGATVVKLVRDYRSTPQVVHLANGLLAQARGR
AADHRLELVSQRPAGPEPVCTEYTDEPAEAEGAARRIRELIDAGVPAAEIAVLFRTNGQS
ETYEQALADAGVPYQLRGAERFFDRPEVRKAGIALRGAARFGGNDSLLDDAVDLPSQVRA
VLSSEGWTTEPPAGSGAVRERWESLAALVNLAHDLSAARPGVTLGDFVTELDERANAQHA
PTVQGVTLASLHAAKGLEWDVVFLVGIAEGMLPITYARTDEQIEEERRLLYVGVTRARER
LHLSWALSRSPGTRPNRRPSRFLDGLRPGTTATVGHSGAAATGGIERGTTTGALAAPRRT
QRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYERLREWRAVQAERSGQPDFCVFT
DRTLMAIAEARPGTPAELSRIPGVLSRKLRSYGTDVLAICAGHEAGEGDEDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagggctcgaccccgagcagcgcgcggtggccaccgccctgcacgggccggtg
tgcgtcctggccggagcgggcaccggcaagacgcgggcgatcacgcaccgcatcgcctac
ggtgtgcgcgccggcatcctccagccctccagcgtgctcgccgtcaccttcaccaaccgc
gccgccggagagatgcgcggccggctgcgccagctcggcgcccacggcgtccaggcccgc
accttccactccgccgccctgcgccagctccattacttctggccgaaagcgatcggtggt
ggcatgccccggctggtcgaccgcaagatccagctcgtcgccgacgcggccgcgagcctg
ggcacccggctcgaccggggcgagctgcgggacgtcaccgccgaaatcgaatggtccaag
gtcacccagaccatcccggccgactacccgtacgcggccgcgaaggccggccgtgaggcc
ccgcgcgatgccaccgagatcgcccacctctacgcggcctacgaagacctcaagcgcgac
cgcgccgtgatcgacttcgaggacgtcctgctgctcaccgtcgccatcctgcaggaccgg
cacgacatcgccgaccaggtccgcgcgcagtaccagcacttcgtcgtcgacgagtaccag
gacgtcagccccctgcagcagcggctgctggagctctggctcggcgaccgcgacgacctg
tgcgtcgtcggcgacgccagccagaccatctactccttcacgggcgcaacgcccgaccac
ctcctcgacttccgcacccggcaccccggcgccacggtcgtcaaactcgtccgcgactac
cgctccaccccccaggtggtccacctcgccaacggcctgctcgcccaggcccgcggccgc
gccgccgaccaccggctggaactcgtctcccagcgccccgccggccccgaacccgtctgc
accgagtacaccgacgagccggccgaggccgaaggcgccgcccgccgcatccgcgagctg
atcgacgcgggcgtcccggccgccgagatcgccgtcctgttccgcacgaacggacagtcc
gagacgtacgagcaggccctcgccgacgccggcgtgccctaccagctgcgcggcgccgag
cgcttcttcgaccggcccgaggtgcgcaaggccggcatcgccctgcgcggcgcggcccgc
ttcggcggcaacgactccctgctggacgacgccgtggacctgccctcccaggtgcgtgcc
gtcctgtcctcagagggctggaccaccgagcccccggccggctccggcgccgtcagagag
cgctgggagtccctcgccgccctggtcaacctcgcccacgacctctccgccgccagaccc
ggcgtcaccctcggcgacttcgtgacggaactcgacgagcgggcgaacgcccagcacgcc
ccgaccgtccagggcgtcaccctcgcctccctgcacgccgccaagggcctggagtgggac
gtggtcttcctggtcggcatcgccgagggcatgctgcccatcacctacgccaggaccgac
gagcagatcgaggaggaacgccggctgctctacgtgggcgtcacccgggcgcgggaacgg
ctccacctgtcctgggcgctgtcccggtcacccggcacccgccccaaccgccggcccagc
cgcttcctcgacggactgcgccccggcaccacggccaccgtcggccacagcggcgccgcc
gcgaccggaggcatcgagcgcggcaccaccaccggcgccctcgccgctccccgccgtacc
cagcgcaccccggcccgctgccgggtctgcggccgcacgctcaccgacgcgggcgagatg
aagctgatgcgctgcgaggactgtccctcggacatggacgagggactctacgaacggctg
cgggagtggcgggccgtccaggccgagcgcagcggacagccggacttctgcgtcttcacc
gaccgcaccctgatggccatcgccgaggcccggcccgggactccggccgaactctcccgc
atccccggtgtcctcagccgcaagctgcgcagctacggaaccgacgttctggccatctgc
gcaggccacgaggccggagagggcgacgaggacgactga
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