Streptomyces incarnatus: ABB07_13205
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Entry
ABB07_13205 CDS
T09785
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03420
Nucleotide excision repair
sinn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABB07_13205
03430 Mismatch repair
ABB07_13205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_13205
Enzymes [BR:
sinn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABB07_13205
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABB07_13205
MMR (mismatch excision repair)
Other MMR factors
ABB07_13205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKJ10939
LinkDB
All DBs
Position
complement(3034454..3038062)
Genome browser
AA seq
1202 aa
AA seq
DB search
MPSRITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRLGLEPTSRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLALDSELAEH
LVDPEELRLWDADLLRTLQSAKLTNADLRKVPETAAARRELADLVRRYRTAKRERDLLDF
GDQIALSARLARIPEVGRLLREEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPAHFAHADGRPATRQALSENRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAEYDGTVRCALLPTHAEEIDWIAGSIAHLVHTGTAPGEIAVLCRTATD
FAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVAHARVADGDDPDRRLAAAVEGVDPAEVISLADALDTFLESPREDD
TEDDELPFSADARVRFARLATELRDLRRSLSDPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDTAASFAASDSEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVKGTFPSAQGREKWTAQAKVVPHALRGDTDTLPDVDSWDARGMKAF
HEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLQALHDHCAAGYG
EIEAWAEEPAEDAENPALHTAGADQVWPLPLDAAALARRRAAAETVLAHLDALAAQDTTH
PPAAHDPAALDDPDWPVPPDEEDGYDRDPYSDEPYEPDAGEPYAGEPYAGHPYAGEPHAE
GPYDDDPYGSEAPYADGTGAQDPDGWDSWSAERPTVPHQAPPPGARAPHGPAPDASLTPE
EARAIASWDRDLDALTGELLRARQAVTDVPLPATLTASQLLRLAEDPDGLAQELARPMPR
PPQPAARRGTRFHAWVEARFEELRLPLLEPDELPGSDAEIADEQDLEALKEAFERTEYAR
RTPYRVEAPFQLTLAGRVVRGRIDAVYQHGDGERTTYEIVDWKTSRTRTADPLQLAVYRL
AWAEQQGVPPESVTAAFVYVRSGEVVRPRDLPDRAALERLLREDTRAADSGTEDSETARR
AP
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgccctcccgtatcaccgaccccgagcagctcaaggagctactcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagaccaccgtgatggccgcccgcgtggtctggctggtcggcaccggccag
gtcgctcccgagcaggtcctcggcctgaccttcaccaacaaggccgccggcgaactggcc
gaacgcgtccgcaaggcactgatcaaggccggcgtcaccgacccggacgtcatcgatccc
gacaacccgcccggcgagcccgtgatctcgacgtaccacgccttcgccggccgcctcctc
accgaccacggcctgcgcctcggcctggagcccacctcccgcctcctcgccgacgccacc
cgctaccagctcgccgcgcgcgtgctgcgcgaggcacccggcccctaccccgcgctgacc
cgctccttcgccgacctcgtcagcgacctgctcgccctcgactccgagctcgccgaacac
ctcgtcgaccccgaggagctgcgcctctgggacgcggacctgctgcgcaccctccagagc
gccaagctcaccaacgccgatctgcgcaaggtgcccgagacggccgccgcgcgccgcgag
ctggccgacctcgtccgccgctaccggaccgccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctgtccgcccgcctcgcccgcatccccgaggtcggccggctgctg
cgcgaggagttccgcgtggtgctcctggacgagtaccaggacacctccgtggcccaacgc
gtcctgctggcgggcctgttcggcggcggaacgggccatcccgtgaccgccgtaggcgac
ccctgccaggccatctacggctggcgcggtgcctccgtcgccaacctggacgacttcccc
gcgcacttcgcgcacgccgacggccgccccgccacccggcaggcgctcagcgagaaccgc
cgcagcggcggccgcctcctcgacctcgccaacggactcgccgaacccctgcgcgccatg
cacgcgggcgtggaggccctgcgcccggcccccggcgccgagtacgacggcacggtccgc
tgcgccctgctgcccacccacgccgaggagatcgactggatcgccggctccatcgcccac
ctcgtgcacaccggcacggcccccggcgagatcgccgtcctgtgccgtacggcgaccgac
ttcgccgagatccagggtgccctggtggcccgggacgtccccgtcgaggtggtcggcctg
tccgggctgctgcacctgccggaggtcgccgacctcgtcgccgtctgcgaggtcctgcag
gaccccggcgccaacgcctccctggtgcgcctgctcaccggcccgcgctggcgcatcggc
ccccgcgacctcgccctcctgggccgccgcgcccgcctcctggtggcccacgcacgcgtg
gcggacggcgacgaccccgaccgccggctcgccgcggccgtcgaaggggtcgatccggcg
gaggtgatatcgctcgcggacgccctcgacaccttcctcgaatcaccgagggaggacgac
accgaggacgacgagctgccgttctcggcggacgcgcgcgtgcgcttcgcccggctggcg
accgagctgcgcgacctgcgccgctcgctgtccgacccgctgatggacgtcctgcaccgc
gtgctcgccgtcaccggcctggaggtggagctgtcggcgtccccgcacgccctggccgcc
cgccgccgcgagaccctgtccaacttcctggacaccgccgcctccttcgcggcgagtgac
agcgaggccaccctgctcgccttcctcggcttcctgcgcaccgccgcgcagtacgagaag
ggcctcgacaacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcccacaag
tccaagggcctggagtgggacgtcgtggccgtccccggactggtcaagggcaccttcccc
agcgcgcagggccgcgagaagtggacggcacaggccaaggtggtgccgcacgccctgcgg
ggcgacaccgacaccctgcccgacgtcgacagctgggacgcgcgcggcatgaaggccttc
cacgaggccatgaaggaccaccagcacaccgaggagctccgcctcggctacgtcaccttc
acccggccccgctccctcctgctgggttccggccactggtggggccccagccagaagaag
ccgcgcggcccctccgacttcctccaggccctccacgaccactgcgccgccgggtacggc
gagatcgaggcctgggcggaggagcccgccgaggacgcggagaacccggcgctgcacacg
gccggcgccgaccaggtgtggccgctcccgctggacgccgccgccctggcccgccgccgc
gcggccgccgagaccgtcctggcccacctggacgcgctcgccgcccaggacaccacccac
ccgccggccgcccacgaccccgccgccctcgacgacccggactggcccgtacccccggac
gaagaggacggttacgaccgggacccctacagcgacgaaccgtacgagcccgatgccggg
gaaccgtacgcgggcgagccctacgccggacacccgtacgcgggcgagccccacgccgag
ggcccgtacgacgacgacccgtacgggagcgaggccccgtacgcggacggcaccggtgct
caggatcccgacggatgggactcctggagcgccgagcggccgaccgttccccaccaggcg
cccccgcccggcgcccgcgccccgcacggtcccgcccccgatgcctccctcacccccgag
gaggcccgcgccatcgcctcctgggaccgtgacctggacgcgctcaccggagagctgctg
cgcgcccgccaggccgtcaccgacgtcccgctgcccgccacgctcaccgcctcccagctg
ctgcgcctggccgaggacccggacgggctcgcgcaggaactcgcgcgccccatgccgcgc
cccccgcaaccggccgcacgccggggcacccggttccacgcctgggtcgaagcccgcttc
gaggaactgcgactgcccctgctcgaaccggacgagctgccgggcagcgacgccgagatc
gccgacgaacaggacctggaagccctgaaggaggccttcgaacgcaccgagtacgcccgg
cgcaccccctaccgggtcgaggcccccttccagctcaccctcgccggccgcgtcgtacga
ggccgtatcgacgcggtgtaccagcacggcgacggcgagaggacgacgtacgagatcgtc
gactggaagaccagccgcacccgcaccgccgacccgctccagctcgccgtgtaccggctg
gcctgggccgagcagcagggcgtgccgccggagtcggtcacggccgccttcgtctatgtg
cgcagcggcgaggtcgtacggccgcgtgacctgccggaccgggccgccctggaacggctc
ctcagggaggacacccgagcggcagactccggaacggaagactccgaaacggcacggcgg
gcaccctga
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