Streptomyces incarnatus: ABB07_14940
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Entry
ABB07_14940 CDS
T09785
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03420
Nucleotide excision repair
sinn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABB07_14940
03430 Mismatch repair
ABB07_14940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_14940
Enzymes [BR:
sinn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABB07_14940
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABB07_14940
MMR (mismatch excision repair)
Other MMR factors
ABB07_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKJ11275
LinkDB
All DBs
Position
complement(3425864..3428356)
Genome browser
AA seq
830 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHEEEPPPPPEDDHAPEPLPDDLFGGKFDMPPDRDTHYRDGAP
RPAIDSAALLEGLNDNQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERHVHPGQI
LAITFTNKAAGEMKERVEHLVGPRANVMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTAERPADEGDTPTGEYDIPPAELCVVGDADQSIYAFRGATIRNILQFEEDYADATTIL
LEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGQGARITGYVADTEHDEAQFVADEID
RLVDAGEARAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRV
LANPEDSVPLRRILNVPKRGIGERAEAMIDALAQRERISFPQALKRVDEAYGMAARSTNA
VKRFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQTSTDPQDETRIENLQELAAVA
LEFEQERGEGESVGLADFLEQVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFL
TGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSAMRSAWGQPSYNPPSRF
LEEIPPTHVDWKRTGATAPVSSGPASGIAASLSSTRSRSSASGASGFATRRTSEKPVVAL
AVGDRVTHDQFGLGTVVAVKGTGANAEATIDFGDAKPKRLLLRYAPVEKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccctcgcgggcacgag
gaggagcccccgccgccgcccgaggacgatcacgctccggagccgcttccggacgatctg
ttcggcgggaagttcgacatgccgccggaccgggacacccactaccgcgacggcgcgccc
cgccccgcgatcgactcggcggcgctgctggaggggctgaacgacaaccagcgcgcggcg
gtcgtgcacgccggctccccgctgctcatcgtcgccggcgccggctccggcaagacccgc
gtgctcacccaccgcatcgcgtacctgctcgccgagcggcatgtgcaccccggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcacctc
gtcggcccgcgcgcgaacgtgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatc
ctgcgccgcgagtcgaagaagctcggcttcacgtcgtcgttctcgatctacgacgccgcc
gacagcaagcgtctgatggccctggtctgccgcgacctggacctcgacccgaagcgcttc
ccgccgaagtccttcagcgcgaagatcagcaatctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccaccgacggcttcgagaagaccctcgcccaggcctacgcgctc
taccagtcgcggctccgcgaggccaacgcgctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgcactcgtacgggaactc
gtcggcacggcagagcgccccgccgacgagggcgacaccccgaccggcgagtacgacatc
ccgccggccgagctgtgcgtcgtgggtgacgccgaccagtcgatctacgccttccggggc
gcgaccatccgcaacatcctccagttcgaggaggactacgcggacgcgacgacgatcctg
ctggagcagaactaccgctccacgcagaccatcctgtccgcggccaacgcggtcatcgag
cgcaacgagtcccgccgcccgaagaacctgtggaccaacgccgggcagggagcgcggatc
accggttacgtcgcggacaccgagcacgacgaggcccagttcgtcgccgacgagatagac
cgcctggtcgacgcgggcgaggccagggcgggcgacgtcgccgtcttctaccgcaccaac
gcgcagtcccgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtc
ggcggcgtccgcttctacgaacgcaaggaggtccgggacgtcctcgcctacctgcgcgtc
ctcgccaacccggaggactcggtgccgctgcgccgcatcctcaacgtgcccaagcggggc
atcggtgagcgcgcggaggcgatgatcgacgccctcgcccagcgcgagaggatcagcttc
ccgcaggcgctcaagcgcgtggacgaggcgtacggcatggccgcgcgctccaccaacgcc
gtcaagcggttcaacacgctgatggaggacctgcgtacgatcgtggagtccggagccggt
ccggccaccgtcctggaggccgtgctcgaacggaccgggtatctggccgaactgcagacc
tccaccgacccgcaggacgagacccgcatcgagaacctccaggaactcgcggcggtggcc
ctggagttcgagcaggagcgcggtgagggcgagtcggtggggctggccgacttcctggag
caggtggccctggtcgccgactccgaccagatccccgacgaggacgaggacggctccgga
gtcatcaccctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctg
accggcatggaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctg
gaggaggagcgccgcctggcgtacgtcggcatcacgcgcgcgcgggagcggctctacctc
acgcggtcggccatgcgcagcgcctggggccagccgtcgtacaacccgccctcccgcttc
ctggaggagatcccgcccacccatgtggactggaagcggacgggagcgacggcaccggtc
tcgtccggtcccgcgtccgggatcgcggcctcgctgtcctcgacccgctcgcgttcctcg
gcgtcgggcgcgtccgggttcgccacccggcgcacctcggagaagccggtggtcgccctg
gccgtcggggaccgggtcacccacgaccagttcgggctcggcacggtcgtcgccgtgaag
ggcacgggtgcgaacgcggaggcgacgatcgacttcggcgacgccaagccgaagcggctg
ctgctgcggtacgcgccggtggagaagctgtaa
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