Streptomyces incarnatus: ABB07_15715
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Entry
ABB07_15715 CDS
T09785
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABB07_15715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinn03021
]
ABB07_15715
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_15715
Enzymes [BR:
sinn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABB07_15715
Transcription machinery [BR:
sinn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABB07_15715
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABB07_15715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKJ11424
LinkDB
All DBs
Position
complement(3585850..3589749)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLESD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGEMRDVKGE
GRSFASVAEAIMAFDAGELSLQSRVDIRFPVGTIPPRGWTPPAREEGEPEWQQGDSFRLN
TTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVRGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNENFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLAIAERG
EDGVLRKTGNVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELVKHGVETVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVVTPDDGSDETAYPISKRAKV
LVSEGEHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtcctacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgttccgtcgcgcctgggctacctgctcgacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtacgtcgac
gaggagcgccgtacccgcgacctgccctccctggaggcgcacgtctcggtcgagcgccag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagtccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggagccgcggcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgccctgaagcgcctgaaggtcgtctcc
gcgttcctgcagacgtccaacagccccaagggcatggtcctggactgcgttccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgtctgaagcggcttctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgttgacgcc
ctcttcgacaacggccgtcgcggtcgcccggtgaccggtcccggtaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgtgtcgactactcggcgcgttccgtgatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtcctgctgaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagatgcgtgacgtcaagggcgag
ggccgctcgttcgcgtccgtggccgaggcgatcatggcgttcgacgccggcgagctgtcg
ctgcagtcgcgcgtggacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggcgcgcgaggagggcgagccggagtggcagcagggtgacagcttccggctgaac
accacgctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttctactgggcgacc
cgttccggtgtcaccgtggccatctccgacgtcgtcgtgcccgaggcgaagaaggagatc
gtccgcggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttcccgaagaccaacccgatcttcatgatggtgaactcg
ggtgcacgaggcaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcg
aacgccaagaacgagaccatcccgcgtccgatcaaggcctcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggcctcaagctggcgatcgccgagcgcggc
gaggacggtgtcctgcgcaagacgggcaacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtggtcgacggcaaggtgctggccccggccggtaccgacctcggcgac
gtgctcatcgacgagctggtcaagcacggcgtggagacggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgcgatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcctacccgatctccaagcgtgccaaggtc
ctggtcagcgagggcgagcacgtcgaggtgggccagcagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gagtcctggctgtcggccgcctccttccaggagacgacccgagtcctgacggacgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
DBGET
integrated database retrieval system
