Streptomyces incarnatus: ABB07_16660
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Entry
ABB07_16660 CDS
T09785
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sinn
Streptomyces incarnatus
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinn03016
]
ABB07_16660
Enzymes [BR:
sinn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABB07_16660
Transfer RNA biogenesis [BR:
sinn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABB07_16660
Prokaryotic type
tRNA splicing ligases
ABB07_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AKJ11605
UniProt:
A0ABN4GD84
LinkDB
All DBs
Position
complement(3772364..3773557)
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AA seq
397 aa
AA seq
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MSYVEMPGAKVPIRMWTDPATVEDVALRQLQNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDDPVEPG
DFHGLATAGWADFWGRFDGVAEAVKFRRERAHKQMGTLGSGNHLIELCLDQSNSVWLMLH
SGSRNIGKELAEHHIGVAQKLPHNQGLVDRDLAVFVSDTPQMAAYRNDLYWAQEYAKYNR
ALMMAILKDVVRKEFKKAKPTFEPEISCHHNYVAEERYEGMDLLVTRKGAIRARSGEFGI
IPGSMGTSSYIVKGLGNEKAFNSASHGAGRRMSRNAAKRHFTVKDLEEQTRGVECRKDAG
VLDEIPGAYKNIDQVMAQQRDLVEVVAKLKQFICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggtcccgatccggatgtggaccgaccccgcg
acggtcgaggacgtggccctgcgccagctccagaacgtggcgaccctgccctggatcaag
ggcctcgcggtcatgccggacgtccactacggcaagggcgcgacggtcggctccgtcatc
gccatgcagggcgcggtgtgcccggcggcggtgggggtggacatcggctgcgggatgtcg
gcggtgaagacgtccctgacggccaacgacctgccgggcgacctgtcgcggctgcggtcg
aagatcgagcaggcgattccggtggggcggggcatgcatgacgatcccgtggagccgggg
gacttccatgggctggccaccgccgggtgggccgacttctgggggcggttcgacggggtc
gcggaggcggtgaagttccggcgggagcgggcgcataagcagatgggtacgctcggaagc
ggcaaccacctgatcgagttgtgtctggatcagtcaaattcggtctggctgatgttgcac
tccggttcccgcaacatcggcaaggaactcgccgagcaccacatcggtgtcgcgcagaag
ctcccgcacaaccaggggctggtcgaccgtgacctggcggtgttcgtctcggacaccccg
cagatggcggcgtacaggaacgatctctactgggcgcaggagtacgccaagtacaaccgc
gcgctcatgatggcgatcctgaaggacgtggtccgcaaggagttcaagaaggccaagccg
actttcgagccggagatctcgtgccaccacaattacgttgctgaggagcggtacgagggc
atggatctgctcgtgacccgcaagggagcgatccgagcccgctccggggagttcgggatc
attccgggctcgatgggtaccagctcgtacatcgtgaagggcctcgggaacgagaaggct
ttcaactcggcgtcccacggggcaggtcggcgtatgagccgcaacgcggcgaagcggcat
ttcaccgtcaaggaccttgaggaacagacgcggggtgtggagtgccgcaaggacgcgggg
gtgctggatgagattccgggcgcctacaagaacatcgaccaggtgatggcgcagcagcgt
gatctcgtggaggtcgtggcgaagttgaagcagttcatctgcgtgaagggctga
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integrated database retrieval system
