Streptomyces incarnatus: ABB07_19725
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Entry
ABB07_19725 CDS
T09785
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sinn
Streptomyces incarnatus
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinn03021
]
ABB07_19725
Transcription machinery [BR:
sinn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABB07_19725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AKJ12184
UniProt:
A0ABM5TMI3
LinkDB
All DBs
Position
complement(4467712..4468668)
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AA seq
318 aa
AA seq
DB search
MSAEQGSSKVLTPATGDAAPKELDALDVLDGIEGVTALDAVPAPPAPAAADLPAPAALPA
PPASGDIDTRTLSRSLFLRLAALDENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPME
DIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLA
LTKASDELSQKLDRSPTVTELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGS
LADRLGYEDTALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHV
SRLLTRTLAQLREGLISD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctgacgcccgcgaccggcgacgcagcgccc
aaggagctcgacgctctcgacgtcctcgacggcatcgagggcgtcacggccctcgatgcc
gtgccggccccgcccgccccggcggccgccgacctcccggcgcccgccgcgcttccggcc
ccgccggcctcgggggacatcgacacccgcaccctgtcccgctccctgttcctgcggctc
gccgcgctcgacgagaacagtcccgagcgggcctacgtccgggacaccctgatcgagctg
aacctgccgctggtccgctacgcggccgcgcgcttccgctcccgcaacgaaccgatggag
gacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaa
cggggcgtggagttcccgaccttcgcgatgccgacggtggtcggcgagatcaagcggttc
ttccgcgacacgtcctggtcggtgcgggtcccgcgccgcctgcaggagctgcgcctggcc
ctcaccaaggccagcgacgagctgtcccagaagctggaccgctccccgacggtgaccgag
ctggccgccgtgctcggcgtctccgaggaggacgtggtcgacggcctcgcggtcggcaac
gcctacaccgcctcctcgctggactccccggcccccgaggacgacggcggcgagggctcg
ctcgccgaccgactcggctacgaggacacggcgctggagggcgtggagtaccgcgaatcc
ctcaagcccctgctggccaaactcccgccccgggagcgccggatcatcatgctgcgcttc
ttcgccaacatgacccagtcccagatcggcgaggaggtcggcatctcccagatgcacgtc
tcacgactgctgacccgcaccttggcgcagttgcgcgagggcctgatctcggactag
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