Streptomyces incarnatus: ABB07_19730
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Entry
ABB07_19730 CDS
T09785
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sinn
Streptomyces incarnatus
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinn03021
]
ABB07_19730
Transcription machinery [BR:
sinn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABB07_19730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
NirdL-like_HTH
MarR
HTH_3
DUF134
DUF4423
DUF7343
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AKJ12185
LinkDB
All DBs
Position
complement(4469018..4469902)
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AA seq
294 aa
AA seq
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MTAFDRSLSDEEVALTVSASTAPPQEEASTPAPAPVAPEKRRGADTRALTQVLFAELKQL
TPGTPEHHRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGV
QFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTLHGRSPSTAEIAE
RLRISEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRIGYDDPALDGVEHRDLIRHLL
VQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttttgaccgatcattgagcgacgaagaggtggcgttgaccgtgtcggccagt
actgcgccgccccaggaggaggcgagcacccccgcccccgctcccgtggctcccgagaag
cggcgcggtgccgacacccgagccctcacccaggtgctcttcgccgagctgaagcagctc
accccgggcacgccggagcaccaccgggtgcgcggggcgctgatcgaggcgaacctcccg
ctcgtgcgctacgcggccgctcgcttccgctcccgcaacgagccgatggaggacgtcgtc
caggtcggcaccatcggcctgatcaacgccatcgaccggttcgacccggaccggggcgtg
cagttcccgaccttcgccatgccgaccgtggtcggcgagatcaagcggtacttccgggac
aacgtccgcacggtccacgtaccgcgccgactgcacgagctgtgggtgcaggtcaacagc
gccaccgaggacctcaccacgctgcacggccgctccccctccaccgccgagatcgccgag
cggctcaggatcagcgaggaggaggtgctcagctgcatcgaggcgggccggtcgtaccac
gccacctcgctggaggccgcgcaggagggcgacgggctgcccggcctgctggaccggatc
ggctacgacgacccggccctggacggcgtggaacaccgcgacctgatccggcatctgctc
gtccaactccccgagcgcgaacagagaatccttctcctgcgctactacagcaatctcacc
cagtcccagatcagcgcggaactcggcgtctcccagatgcacgtctcccggctcctcgcc
cgcagcttccagcggctgcgctcggcgaatcgcatcgacgcgtag
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