Streptomyces incarnatus: ABB07_28360
Help
Entry
ABB07_28360 CDS
T09785
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sinn
Streptomyces incarnatus
Pathway
sinn03030
DNA replication
sinn03410
Base excision repair
sinn03420
Nucleotide excision repair
sinn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABB07_28360
03410 Base excision repair
ABB07_28360
03420 Nucleotide excision repair
ABB07_28360
03440 Homologous recombination
ABB07_28360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinn03032
]
ABB07_28360
03400 DNA repair and recombination proteins [BR:
sinn03400
]
ABB07_28360
Enzymes [BR:
sinn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABB07_28360
DNA replication proteins [BR:
sinn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABB07_28360
DNA repair and recombination proteins [BR:
sinn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABB07_28360
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABB07_28360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AKJ13812
LinkDB
All DBs
Position
6378306..6381032
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKKTDKTPGGTRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEKFTEYKANRSKTPDEFKGQVELIGELLDAMHAPRF
AVDGFEADDVIATLATQAEAEGFEVLIVTGDRDSFQLVTDNITVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVDEVKG
KAGQNLRDHLESVKLNRVLTELERQVELPRAVADLERAAYDRRAVTLVLDTLEIRNPSLR
ERLFAVDPGAEEAEVTPIATDGVELDGKILRTGELAPWLAEHGAGTLGVATVDTWALGTG
SVAEVALAAAGGAAAWFDPAELDEADENAFAAWLADAARPKVFHNAKGAMRVLAEHGWSV
EGVTMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAADGQLAFGADEGAEAEALMI
QARAVLDLGEAFGTRLEEVGAADLLRDMELPTSALLARMERHGIAADRAHLETMEQTFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKKTKTGYTTDADALAWLATQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAGDGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIQAFTSGEDLHTTAASQV
FGVEPAAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARALMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVDSALREADLKSRMLLQVHDEIVLEIAPGEQSAAEQVVRKEMSNAVHLRAPLDVSVGVG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagaagaccgacaagacccccggcggcacccgtccccggctg
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgaccggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcc
aacaccctgcgtgacgaggcgcccacgcacttcgccgtggccttcgacgtctcgcgcaag
acctggcgctccgagaagttcaccgagtacaaggcgaaccgctccaagacccccgacgag
ttcaagggccaggtcgagctgatcggcgagctcctcgacgcgatgcacgccccgcgcttc
gccgtggacggcttcgaggcggacgacgtcatcgccaccctcgccacccaggccgaggcc
gagggcttcgaggtgctgatcgtcaccggcgaccgcgactccttccagctggtcaccgac
aacatcaccgtgctctacccgaccaagggcgtctccgagctgacccggttcaccccggag
aaggttttcgagaagtacggcttgacgcccgcccagtacccggacttcgcggccctgcgc
ggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaagaccgcggcgaag
tggatcaaccagttcggctcgttcgccgagctggtcgaacgcgtcgacgaggtcaagggc
aaggccgggcagaacctccgcgaccacctggagtcggtcaagctcaaccgcgtcctcacc
gagctggagcgccaggtcgagctgcccagggcggtcgccgacctggagcgggccgcgtac
gaccgcagggccgtcacgctggtcctggacaccctggagatccgcaacccgtccctgcgc
gagcgtctcttcgccgtcgaccccggcgccgaggaggccgaggtcacgccgatcgccacc
gacggggtggagctggacggcaagatcctgcgcaccggcgagctggccccctggctcgcc
gagcacggcgccgggaccctgggcgtcgccaccgtcgacacctgggcgctgggcaccggc
tcggtcgccgaggtcgccctggccgcggccgggggagcggccgcctggttcgaccccgcc
gagctggacgaggccgacgagaacgcgttcgcggcctggctggccgacgccgcccgcccc
aaggtgttccacaacgccaagggcgccatgcgcgtcctcgccgagcacggctggtccgtc
gagggcgtgaccatggacaccgcgctcgccgcctacctcgtcaagcccggccgccgctcc
ttcgacctggacgcgctgtccctggagtacctgcaccgggagctggcgcccgccgccgcg
gccgacggccagctggccttcggcgccgacgagggcgccgaggccgaggctctgatgatc
caggcccgcgcggtcctcgacctgggcgaggccttcggcacccgtctcgaggaggtcggc
gcggccgacctcctgcgcgacatggagctgcccacctccgccctgctcgcccgcatggag
cggcacggcatcgcggccgaccgcgcgcacctcgaaacgatggagcagaccttcgcgggt
gccgtgcagcaggccgtgaaggaggcccacgcggccgccggccacgagttcaacctgggc
tcgcccaagcagctccaggaggtcctcttcggcgagctggccctgccgaagacgaagaag
accaagaccggctacaccacggacgccgacgccctggcctggctcgccacccagaccgac
aacgaactgccggtgatcatgctccgccaccgggagcaggcgaagctgcgtgtcaccgtg
gagggcctaatcaagacgatcgcgggcgacggccgtatccacaccaccttcaaccagacg
gtggcggcgaccggccgcctgtcctccacggacccgaacctgcagaacatcccggtccgc
acggacgagggccgcgcgatccgccgcggcttcgtggtcggcgagggcttcgagtccctg
atgaccgccgactacagccagatcgagctgcgcgtgatggcccacctttccgaggacgag
ggcctgatccaggccttcacctccggcgaggacctgcacaccacggccgcctcgcaggtg
ttcggcgtcgagcccgccgcggtggacgcggagatgcgccgcaagatcaaggcgatgtcg
tacggcctggcctacggcctctccgccttcggcctgtcccagcagctgaacatcgaggcg
gccgaggcgcgcgccctgatggacgcctacttcgagcgcttcggcggcgtccgggactac
ctgcgccgggcggtcgacgaggcccgggcgacgggctacacggcgacgctcttcgggcgc
cgccgctacctgccggacctcaacagcgacaaccgccagcgccgcgaggccgccgagcgc
atggccctcaacgcgcccatccagggcacggccgccgacatcgtcaagatcgccatgctc
aaggtggacagcgccctgcgggaggcggacctgaagtcccgcatgctcctgcaggtccac
gacgaaatcgtgctggagatcgcccccggcgagcagtcggccgccgagcaggtcgtccgc
aaggagatgtccaacgcggtccacctccgggcccccctggacgtctcggtcggcgtcggc
ccggactgggaatcggcagcgcactag
DBGET
integrated database retrieval system
