Streptomyces incarnatus: ABB07_34885
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Entry
ABB07_34885 CDS
T09785
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sinn
Streptomyces incarnatus
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinn03021
]
ABB07_34885
Transcription machinery [BR:
sinn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABB07_34885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_38
HTH_Crp_2
MarR
HTH_27
GerE
MarR_2
HTH_Tnp_4
HTH_35
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AKJ15060
LinkDB
All DBs
Position
complement(7773591..7774475)
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AA seq
294 aa
AA seq
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MNTAGIRSEAEVAERTEQDRTGETSVSLPGIADPASVAPRDARELSRQFFRRLAELDEGT
HEYQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELAREVEFTS
FALPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELSSRLDRDPTVAELATLMNL
SEDEVVEAQLASNGYNSSSLDAALTGSGTEDGEAVLADFIGVEEEGLRLVEDFHALAPLM
AELSDRDRQIIHMRFVEEATQAQIGERLGCSQMHVSRLIKRIIARLRQGMLVDA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgccgggatccggtcggaagcagaggtcgccgagaggaccgagcaggacagg
acgggcgagacatcggtatcactgcctggcatcgcggacccggcgtccgtcgcgccgcgt
gacgcacgggagctgtcccgtcagttcttccgccggctggccgagctggacgagggcacg
cacgagtaccagtacgcgcgcaacaccctgatcgagatgaacatgtcgctggtgcggttc
gcggccggacggttccggggccgcggcgacgacatggaggacatcgtccagaccggcatg
atcggcctgatcaaggccatcgaccggttcgagctggcccgcgaggtggagttcacctcc
ttcgcgctgccatacatcgtcggtgagatcaagcggttcttccgggacacgacatgggcg
gtgcacgtgccgcgccggctccaggagctgcgggtggagctggccaaggcacgcgaggag
ctgtccagccggctggaccgggatccgacggtggccgagctggccaccctgatgaacctc
tccgaggacgaggtggtcgaggcccagctcgcctccaacgggtacaactcctcttccctg
gacgccgcgctcaccggcagcgggacggaggacggcgaggcggtgctcgccgacttcatc
ggcgtggaggaggaggggctgcggctcgtggaggacttccacgcgctcgccccgctgatg
gcggaactcagcgaccgggaccggcagatcatccatatgcggttcgtcgaggaggccacc
caggcgcagatcggggaacgcctcggctgctcccagatgcatgtgtcccggctgatcaag
cggatcatcgcccggctgcgccaggggatgctcgtcgacgcctga
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