Streptomyces incarnatus: ABB07_35205
Help
Entry
ABB07_35205 CDS
T09785
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sinn
Streptomyces incarnatus
Brite
KEGG Orthology (KO) [BR:
sinn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinn03021
]
ABB07_35205
Transcription machinery [BR:
sinn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABB07_35205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_Crp_2
HTH_28
HTH_3
MarR_2
GerE
DinB_2
Sigma70_ECF
HTH_37
HTH_24
HTH_31
HTH_15
Motif
Other DBs
NCBI-ProteinID:
AKJ15123
LinkDB
All DBs
Position
complement(7842905..7843696)
Genome browser
AA seq
263 aa
AA seq
DB search
MRVTGSTTSHPHDDAPDTAQSFERLATLPEGPERRALRDELVQLWLPMAERIAVRFRGRG
ETLEDLYQVAALGLVKAVDHYDPGRGRAFEAYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRAAGKELAQSTSGRPPTVAEIAAHTRLTEDEVRTGMEALECFSALSLDAEVAGTD
GYALGDSLGGPDPGYELVIDRTAVRPCLEALPERERIILYLRFFRGMTQSRIAQQLGISQ
MHVSRLLSSCFDRLREELLAEVR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccggcagtacgacctcccatccccacgacgacgcccccgacacggcgcag
tccttcgagcggctcgcgacgctgcccgagggccccgagcggcgggcgttgcgtgatgaa
ctggtccagctgtggctgcccatggccgagcggatcgccgtacggttccgcggccgcggg
gagaccctggaggacctgtaccaggtggccgccctcggcctggtcaaggccgtcgaccac
tacgatcccgggcgtggccgcgccttcgaggcgtacgccgtgcccaccatcaccggtgag
atcaagcgccacttccgcgaccacatgtggaccctgcacgtgccgcgccgggtgcaggac
ctgcgcaaccgggtccgcgccgccggcaaggaactggcccagagcacttcggggcgcccg
cccaccgtggcggagatcgccgcccacacccggctcaccgaggacgaggtgcgcaccggc
atggaagcgctcgagtgcttctccgcgctgtccctggacgccgaggtggccggcaccgac
ggctacgcgctcggggactccctgggcggccccgaccccggatacgagctcgtgatcgac
cggaccgccgtccggccctgtctcgaggccctgcccgaacgcgagcgcatcatcctctac
ctgcggttcttccgtgggatgacgcagagccggatcgcccagcagctgggcatctcgcag
atgcacgtctcacggctgctcagcagctgcttcgaccggctgcgcgaggaactgctcgcc
gaggtccgctga
DBGET
integrated database retrieval system
