Sinorhizobium sp. CCBAU 05631: SS05631_b51510
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Entry
SS05631_b51510 CDS
T05069
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03030
DNA replication
sino03430
Mismatch repair
sino03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS05631_b51510
03430 Mismatch repair
SS05631_b51510
03440 Homologous recombination
SS05631_b51510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sino03032
]
SS05631_b51510
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_b51510
Enzymes [BR:
sino01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SS05631_b51510
DNA replication proteins [BR:
sino03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SS05631_b51510
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SS05631_b51510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ANTAR
Rv2179c-like
DUF7025
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASY59243
LinkDB
All DBs
Position
pSS05631b:175042..176019
Genome browser
AA seq
325 aa
AA seq
DB search
MASQLDMFPSPLEPGDDVVVKLRPRLKLREPRHLDAESMARHLEKSGSYRVLRKLVARQI
ADKPRPGFPRHGVIIDTETTGLDHSKDEIIEIGAVAFTFNDEGHIGDVTGVYGGLRQPSV
PIPPEITRLTGISDKMVAGQMIDVGLLGALVDPADLVIAHNAGFDRPFCEAFSSMFAGKA
WACSVKEVDWATRGFEGTKLGYLIGQSGYFHDGHRAVDDCFALFEVLAGAGGVTEPSAFA
ELLETSQRSRVRIFAEHSPFDMKNHLKARGYRWSDGSDGRPKSWWTEINEEELAAELAFL
RSEIYRWEEADPPIKRLTAFDRYKA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcagctagatatgtttccctcgccgcttgagccaggcgacgatgtcgttgtg
aagctgcggccgcgcttgaagctgcgcgagccgaggcacctcgatgccgagagcatggcc
cggcaccttgagaagagcggcagctatcgcgtgctgcgtaaacttgttgcccgccagatc
gccgataagccgcgaccgggatttcctcgccatggagtaatcattgacaccgagacaacg
ggtcttgaccacagcaaggacgagatcatcgaaataggcgcagttgccttcacctttaac
gacgagggccatatcggcgacgtcaccggtgtctacggcggcctgcggcagccgagtgtc
ccgatcccccctgaaatcacccgcctcacagggatttccgacaagatggttgcagggcag
atgatcgatgtcgggctgcttggagccctggtcgacccggccgatctcgtgatcgcccac
aatgccggattcgatcggccgttctgcgaggcattctccagcatgttcgccggcaaggca
tgggcctgttccgtcaaggaagtcgattgggcgacgcgcggttttgagggtaccaagctc
ggctatctgattgggcagagcggatacttccacgacggtcatcgggccgtcgacgattgt
tttgctctgttcgaggtgctcgccggcgccggcggggtaacggagccaagcgcttttgcg
gaactgctcgagacaagccaacgctcgcgcgtgcgcatcttcgccgagcacagccccttc
gacatgaaaaatcatctgaaggctcggggataccgctggtcggatggcagtgacggccgt
ccgaaatcctggtggaccgaaatcaatgaggaggagctcgccgcggagctcgctttcctg
aggtcggagatctaccggtgggaagaggccgacccaccgatcaaaagactgacggcgttt
gatcgatataaggcttga
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