Sinorhizobium sp. CCBAU 05631: SS05631_b59780
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Entry
SS05631_b59780 CDS
T05069
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino00040
Pentose and glucuronate interconversions
sino01100
Metabolic pathways
sino02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SS05631_b59780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SS05631_b59780
Enzymes [BR:
sino01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SS05631_b59780
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
ASY60070
UniProt:
A0A249P2B2
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All DBs
Position
pSS05631b:complement(1022587..1024002)
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AA seq
471 aa
AA seq
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MLAGLLLGSQVGPVREAEAATAVQEPLSPKLPDGRQRAFPTAEGFGAGAVGGRGGKVIYV
VNTNESGPGSLRGCIEASGPRVCIFRTGGTITLREKSLLVRNPFLTIAGETAPGGGIAIR
NGETQIRPSIEIWTNDVIIRHIRLRPGPHARKACCSGGLGMYSEAARDIMLDHISASWGS
DETVDSEDASHFTWQWGIASEPLLKGGPGKNNRARNMLFTKGGNVSVHHSLFAFGRFRNP
QIKMKLPGAVADVVNNVLFSPEWQYVVSFGDEWTHIQANVVGNYKIAGQKLRNDHLVHLF
PESGLGHSIYVKDNYDEPYRTAPDQDDSLVLAEDQRRFVVKAPFEAPAIRTSAPMAAFEE
VLENAGATKPERDEADSRIVEDVKSRSGRLLKTDPREVGGWPDLDAGTPYQDGDMDGISD
DWEVKYGLDPAKADDGQQDMDGDGWSNLEEFLHVMAGDPGDGDFRPLPDPQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttggcagggctgctccttggatcgcaggtcgggccggtgcgggaggccgaagctgca
acggcagtgcaggaacctctttcacccaagctgccggacggcaggcagcgtgcctttccg
acggccgaaggcttcggcgccggtgccgttggaggccgcggcggtaaggtcatctatgtc
gtcaacacgaacgagtcgggcccaggatctctgcgcgggtgcatagaagcgtctggaccg
cgcgtctgcatcttccgcaccggcggcacgatcacgctgcgcgagaaatcgctgttggtt
cgaaatccgttcctgacgattgccggggagactgctccgggcggcgggatcgccattcgc
aacggtgagacacagattcgtccttccattgaaatttggaccaacgacgtgatcatcagg
catattcgccttcgacctgggccgcatgcgcgcaaggcgtgttgttccggcggtctcgga
atgtactctgaggcggcaagagacatcatgctcgatcatatctccgccagctggggatcg
gacgagacggtagattcggaagacgccagccatttcacctggcaatggggaattgccagc
gagccgctgctgaaaggcgggccggggaaaaacaatcgtgctcgcaacatgttgttcact
aagggtggcaacgtctcggtgcaccactcgctcttcgcgttcggcaggttcagaaatccg
cagataaagatgaaacttcccggcgcggttgcggatgtcgtgaataatgttctcttctcg
ccagagtggcaatacgtcgtgagctttggcgatgaatggacgcatattcaggccaatgtg
gtgggcaattataagatcgcaggacaaaagttgcgcaacgaccacctggtgcatcttttc
cccgaaagcggcctcgggcactcgatctatgtaaaggacaactatgacgaaccgtatcga
actgcgcctgaccaggatgacagcttggttctcgctgaggatcaaagacgttttgttgtg
aaggcgccgttcgaggcgccggccatccggacgtccgcgcccatggccgccttcgaggaa
gttctggagaatgccggtgccacaaagcccgagcgcgatgaggccgacagccgcattgtc
gaggatgtgaaaagtcgcagcgggcgcctgttgaaaacggatccgcgcgaggtcggcgga
tggcccgatcttgatgctggaacgccataccaggacggggacatggacggcatttcagat
gattgggaggtgaaatacggcctggatccggcaaaggccgacgatggtcagcaggacatg
gatggtgacgggtggtcgaacctcgaagagtttctccacgtcatggccggcgatccggga
gacggcgatttccggccgctgccggatccgcaatga
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