KEGG   Sinorhizobium sp. CCBAU 05631: SS05631_c01670
Entry
SS05631_c01670    CDS       T05069                                 
Name
(GenBank) Helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sino  Sinorhizobium sp. CCBAU 05631
Brite
KEGG Orthology (KO) [BR:sino00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sino03400]
    SS05631_c01670
Enzymes [BR:sino01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SS05631_c01670
    5.6.2.6  RNA 3'-5' helicase
     SS05631_c01670
DNA repair and recombination proteins [BR:sino03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SS05631_c01670
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII PSD4
Other DBs
NCBI-ProteinID: ASY55126
LinkDB
Position
complement(165422..167929)
AA seq 835 aa
MTLTAPFLRWFAEKGWRPRAHQLELLSRAEAGESTLLIAPTGAGKTLAGFLPSLVDLTRR
GKVPPGSAFVGIHTLYISPLKALAVDIERNLMKPVNEMGLPVRIENRTGDTPQGKRQRQK
LNPPDLLLTTPEQLALLIADGEAERFFKNLRYVVLDELHSLVTSKRGHLLALGLARLRRL
APGLQTIGLSATVAEPMELQRWLVGQPPGEQSHAGLITVSGGAKPEISILRGDNHVPWAG
HSARYAIPDVYAAIKQHGTTLLFVNTRSQAEMLFQELWTINDDNLPIALHHGSLDVAQRR
KVEAAMAENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIGRANHRMDEPSR
AILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACARPFDAVELHDE
ITTAAPYADLPWETFERVVDLVATGGYALRTYERYARIRKTKEGRWRISNPMVAQQYRLN
VGTIVESPMLNVRMVKRNARGSLGRGGMPLGKVEEYFLEMLSPGDTFLFSGKVLRFEGIR
ENECLVSQACSFDPKVPSYAGGKFPLSTYLAAQVRKMLADPARRATLPDQVRDWLALQGD
ISMLPGEDELLIETFPRGSRHYMVTYAFEGRLAHQTLGMLLTRRLDRAGLKPLGFVATDY
SLAVWAIDDLGAAFQTRAPSLAELFDEDMLGDDLEAWLNESFLLKRTFRTCAVIAGLIDQ
RHPGKEKTGRQVTVSADLIYDVLRMHEPDHILLEATRNDAAAGLLDIGRLGSMLKRIKGH
ITHRQLDRISPLAVPVMLEIGRESVHGEAQDFLLTEAAADELINEAMGIGHGAGE
NT seq 2508 nt   +upstreamnt  +downstreamnt
gtgacgttgaccgcgccttttctgcgttggttcgccgaaaagggctggcggccgcgcgcc
catcaactcgaattgctgtcgcgcgccgaagcgggggaaagcacgctgctgatcgcgccg
accggtgcgggcaagacgcttgccggcttcctgccgtcgctcgtcgatctcacgcggcgc
ggcaaagtaccgcccggctctgctttcgtcggtatccacacgctctatatctcgccgctt
aaggcgctcgccgtcgatatcgagcgcaatctgatgaagccggtcaacgagatgggcctg
ccggtcaggatcgagaaccgcaccggcgacacgccgcagggtaagaggcagcgccagaag
ctcaacccacccgacctgttgctgacgacgccggagcagcttgccctgctgatcgccgac
ggcgaggctgagcgcttcttcaaaaacctgcgctatgtggtgctcgacgagctgcattcg
ctcgtcacctcgaagcgcggccatctgcttgcccttggcctcgcacggctgcgccgcttg
gcgcccggcttgcagacgatcggcctttcggcgacggtcgccgaaccgatggaactgcag
cgctggcttgtcggccaacctcccggcgagcaaagccatgccgggttgatcaccgtatcc
ggcggtgcaaaacctgaaatctccatcctgcgcggcgacaaccacgtgccctgggcgggg
cactcggcccgctatgcgatcccggacgtctatgccgcgatcaaacagcacggcacgacg
ctgctcttcgtcaatacgcgcagtcaggcggagatgcttttccaggagctctggacgatc
aacgacgacaacctgccgatcgcactccatcacggctcgctcgacgtcgcccagcgccgc
aaggtggaagccgcgatggcggagaaccggctgcgcgccgtcgtcgccacttcgacgctc
gacctcggcatcgactggggcgacgtcgacctggtcgtccatgtgggcgcgccaaagggg
gcgagccggctggcgcagcggatcggccgcgccaaccaccgcatggacgagccgagccgg
gcgatcctcgtgccggccaaccgcttcgaggtgatggaatgccaggccgccctcgatgcc
aattatatcggcgcccaggatacgccgccggtcggcaggggcgcgctcgacgtgctggcg
cagcacgtgctcggcatggcctgcgccagacccttcgacgcggtcgagcttcatgacgag
atcaccaccgcggccccatatgccgatcttccctgggaaacctttgagcgggtcgtcgac
ctcgttgccaccggcggctatgcgcttcgcacctatgagcgctacgcccgcatccgcaag
accaaggaagggcggtggcggatctccaaccctatggtcgcgcagcaataccggctgaat
gtcggcacgatcgtcgaatcgccgatgctgaacgtgcgcatggtgaaacggaatgcacgc
ggctcgctcggccgcggcggcatgccgctcggcaaggtggaggaatatttcctcgaaatg
ctgtcgcccggcgacacgttcctcttctccggcaaggtgctgcgcttcgaaggtatccgc
gagaacgagtgcctcgtttcgcaggcctgttccttcgacccgaaggtgccgagctatgcc
ggcggcaagttcccgctctccacctatctcgcagcccaggtgagaaagatgctcgccgac
ccggcgcggcgcgccacgctgccggaccaggtgcgcgactggctggcgctgcagggcgac
atttcgatgctgcccggcgaggacgagttgctgatcgagaccttcccgcgcggcagccgc
cactacatggtcacttacgccttcgaggggcggctcgcccaccagaccctcggcatgttg
ctcacccgccgcctcgaccgagccggcctgaagccgctcggtttcgtcgccaccgactat
tcgctggccgtatgggcgatcgacgatctaggcgcggcgttccagacgcgggcgccatcg
ctcgccgagctcttcgacgaggacatgctcggcgacgatctggaggcctggctgaacgaa
tccttcctgttgaagcgcaccttccgcacctgcgcggtgattgccggactgatcgaccag
cgccatccgggaaaggagaagaccggccggcaggtcaccgtttcggccgacctcatttac
gacgtattgcggatgcacgagcccgatcacatcctgctcgaagcgacccgcaacgacgcg
gcggccggacttttggacattggccgcctcggctctatgctcaagcgaatcaagggacac
atcacccaccgccaactcgaccgcatctcgccgctcgccgtgccggtcatgctggaaatc
ggccgggaatcggttcacggagaagcgcaggatttcctgctcacggaagcggcggccgat
gagttgatcaacgaggcaatggggatcgggcacggtgcaggcgaatag

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