Sinorhizobium sp. CCBAU 05631: SS05631_c10430
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Entry
SS05631_c10430 CDS
T05069
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03030
DNA replication
sino03430
Mismatch repair
sino03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS05631_c10430
03430 Mismatch repair
SS05631_c10430
03440 Homologous recombination
SS05631_c10430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sino03032
]
SS05631_c10430
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c10430
Enzymes [BR:
sino01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SS05631_c10430
DNA replication proteins [BR:
sino03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SS05631_c10430
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SS05631_c10430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
McdB_C
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
ASY55993
LinkDB
All DBs
Position
1016632..1020126
Genome browser
AA seq
1164 aa
AA seq
DB search
MAGEDSIGQSMADANPQFVHLRVHSAYSLLEGALPLKKIIAKAVADDQPAIGIADTNNLF
AALEFSQKAADEGLQPIIGCQLSIDMEDEAEGERRGHAQQLAKLPSIVLIAATDAGYVRL
VDLVSRAYLEGEGHQAARVTRSWLAAGGTDGLIALTGAGSGPVDLALKAGSSALAEGRLK
ALVELFGNRLYIELQRHGSYDRRHESRLVELAYRYDIPLVATNEAFFPSPADYDAHDALM
AVAHNAVVSDDRRFRLTSDHYLKSRKEMAALFADLPEALENTVEIARRCSFMLKTRGPIL
PRFTGASDDPVEAERAESAELRRQAEEGLEKRLAKLGMAPGYKEEDYRERLAFELGVIER
MKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFERFLNP
ERVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDVGRVLEMPYG
QVDKICKLVPNNPANPTPLSKAIEEEPRLKEEAEKEPVVGRLLDIAQKIEGLYRHASTHA
AGIVIGDRPLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDFV
AKRGIQVDLASIPLDDPKTYEILSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVAL
YRPGPMENIPVYNARKHGEEEIESIHPKIDYLLKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIKEEMDKQRARFVEGAVGNGVSKPQADLIFDLLAKFANYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKINDFRQDAMRLGIQVIAPSVQSSFRPFE
TGDNRIYYSLAAIKGVGESAVDHIVAVRGDRPFASLEDFCLRIDPKLLNRRVFESLIAAG
AFDCFGYDRAELIGGLDRILGFAQRAQENKLSGQSDMFGAGAATGPEKIALPAYTPWLAS
EKLHREFQVLGFYLSAHPLDTYNNLLAKMRVQTFADFSAAVKKGATAGRLAGTVTSKQER
KTRTGNKMGIVAFSDASGQFEAVLFSEMLHQYRDLLEPGKSLVMTVDAEERPEGVGLRIR
TLRSLEEESLQMQKALRVYVRDSGPLRSIASHLNAKGDGLVSFIVIKDNGQREIEVELSE
RYRISPEIAAALRSAPGVVDVELV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgaggatagcattgggcagagcatggcggacgcgaatccgcaattcgttcac
ctgcgcgtgcactcggcatattcgctgctcgaaggcgcgctgccgctgaagaagatcatc
gccaaggcggtggccgacgatcagccggccatcggcatcgccgacacgaacaaccttttc
gcggcgctggaattttcccagaaggcggcggacgagggattgcaaccgatcatcggctgc
cagctctccatcgacatggaggacgaggcggagggggagcggcgcggtcacgcgcagcag
ctcgccaagctgccttcgatcgtcctgattgccgcgaccgacgcaggctatgtccgtctc
gtcgacctggtcagccgcgcctatctcgaaggcgaaggtcatcaggcggcgcgggtgacg
cgctcctggctcgcggcgggcggcaccgatggtctgatcgcgctgacgggcgccggcagc
ggcccggtcgatctggcgctgaaggccggttcgtccgctcttgccgaggggcgcctcaag
gcgctggtcgagctgttcggcaatcgcctctatatcgaactgcaacggcacggcagctat
gatcgacgtcatgagagccggctggtcgagctcgcctatcgctacgacattccgctcgtg
gcgacgaacgaggcctttttcccgtcgccggccgactatgatgcgcatgacgcgttgatg
gccgttgcccacaatgccgtcgtctctgacgaccgccgcttccggctgacgtcggatcac
tatctcaagagccgcaaggagatggcagcgcttttcgccgatcttccggaagcgctggaa
aacaccgtcgagatcgcgcggcgctgctccttcatgctgaagacccgcgggccgatcctg
ccgcgcttcaccggtgcctcggacgatcccgtcgaggccgagcgagccgagtccgccgag
cttcgccgccaggcggaggaggggctggagaagcggctcgccaagctcggcatggcgccg
ggctacaaggaagaagactatcgcgagcgcttggccttcgaactcggcgtcatcgagcgc
atgaagtttccgggttatttcctgatcgttgccgacttcatcaaatgggcgaagcagcac
gacatccccgtcggtccgggccgcggctcgggcgccggctcgctggtcgcctatgcgctg
acgatcaccgacgtcgatccgatgcgcttctcgctcctcttcgagcgcttcctcaatccc
gagcgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgcgaagaggtg
atccgctacgtgcagcagaaatacggccgcgagcaggtggcgcagatcatcaccttcgga
tcgctgcaggcgcgtgcggcgctgcgcgacgtcggccgcgtgctcgaaatgccctacggc
caggtcgacaagatctgcaagctggtgccgaacaatccggcaaacccgacgccgctgtcg
aaggcgatcgaggaggagccgcgccttaaggaggaggcggaaaaggaaccggtcgtcggc
cggctgctcgatatcgcgcagaagatcgagggtctctaccgccacgcctcgacccatgcg
gcgggcatcgtcatcggcgaccgtccgctgtcgcaactggtgccgatgtaccgcgatccg
cgctccgacatgccggtcacccagttcaacatgaaatgggtcgagcaggcaggcctcgtc
aaattcgacttcctcggactgaagaccctaaccgtgctgaagacggcggtcgacttcgtc
gccaagcgcggcattcaggtcgatctggcgagcattccgctcgacgatcccaagacctac
gagattctgtcccgcggcgagacggtcggggtgttccaggtggaaagtgccggcatgcgc
aaagcgctgatcggcatgcggccggactgcatcgaggacatcatcgcgctggtggcgctc
taccgtccgggtccgatggaaaacatcccggtctacaacgcccgcaagcatggcgaggaa
gagatcgaatcgattcatccgaaaatcgattacctgctcaaggaaacgcaaggcgttatc
gtctaccaggagcaggtgatgcagatcgcccaggtgctgtcgggctattcactcggcgag
gccgatctcttgcgccgcgccatgggcaagaaaatcaaggaggagatggacaagcagcgc
gcccgcttcgtcgagggcgcggtcggcaatggcgtgtcgaagccgcaggcggacctgatc
ttcgatctgctcgccaaattcgccaattacggcttcaacaagtcgcatgcggccgcctac
gccatcgtctcctaccagaccgcctatatgaaggcgcattatccggtcgagttcctcgcg
gcgtcgatgacgctcgacatgtcgaacactgagaagatcaacgacttccgccaggacgcg
atgcgcctcggaattcaggttatcgccccctcggtgcagagctcgttccgtcctttcgag
accggcgacaaccggatctattactcgctggccgccatcaagggcgtcggtgaatccgcc
gtcgaccacatcgttgccgttcgcggcgaccgtcccttcgcgagcctcgaggatttctgc
ctccggatcgacccgaaacttctgaaccggcgcgtctttgaaagcctgatcgccgccggt
gctttcgactgcttcggttacgaccgggccgagctcatcggcggcctcgaccggattctc
ggctttgcgcagcgcgcccaggaaaacaagctcagcggccagagcgacatgttcggcgcg
ggcgctgcgacgggtcccgaaaagatcgctctgccggcctacacgccctggcttgcctcg
gagaagctgcaccgcgagttccaggtgctcggcttctacctttccgcccatccgctcgat
acctacaacaatctcctggcgaagatgcgggtgcagacattcgcggatttttccgccgcc
gtgaagaaaggggcgaccgcgggccgccttgccggcaccgtgacgtcgaagcaggagcgc
aagacgcgtaccggcaacaagatgggcatcgtcgccttctccgatgcgtcgggccagttc
gaggcggtgctgttttccgaaatgctgcaccagtatcgggacctgctggaacccggcaag
tcgctggtgatgacggtagacgcggaggagcggccggaaggcgtcggccttcgcatccgg
acgctgcggtcgctcgaagaggaatcgctgcaaatgcagaaggcgctgcgcgtctatgtg
cgggactccggccccttacgctccatcgcctcgcacctcaacgccaagggcgacggcctc
gtctccttcatcgtcatcaaggacaacggtcagcgggagatcgaggtcgagctcagcgag
agataccggatctcgccggaaatcgctgcggcccttcgctccgcgccgggtgtcgtggac
gtcgagctggtatag
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