Sinorhizobium sp. CCBAU 05631: SS05631_c11210
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Entry
SS05631_c11210 CDS
T05069
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SS05631_c11210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sino03021
]
SS05631_c11210
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c11210
Enzymes [BR:
sino01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SS05631_c11210
Transcription machinery [BR:
sino03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SS05631_c11210
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SS05631_c11210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ASY56067
UniProt:
A0A249NRJ8
LinkDB
All DBs
Position
1089447..1093652
Genome browser
AA seq
1401 aa
AA seq
DB search
MNQEVMNLFNPQVPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIATLLDMTLKDIERVLYFENYIVTEPGLTSLKENQLLSEEEYMIAVDEFGEDQFTA
MIGAEAIYEMLASMNLEKIAGDLRAEMAETSSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDMGELHHALE
TKAVTLHAKIRGRYKTVDAEGNPVSKIYETTPGRMIIGELLPKNPNIPFEICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFAHACRAGISFGKDDMVIPDTKVKIVGDTEAL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDDNGRQKPMNSIYM
MSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVTHVDCGTDKGLTMTAIVDAGQVVASLGQRILGRTA
LDNIDNPVTGERIVDAGKMILEADVATIEKAGIQSVRIRSALTCEIQTGVCGVCYGRDLA
RGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRNM
LRNSDGVLVAMGRNMAIQILDERGVERSSQRVAYGSKIFVDDGDKVKRGQRFAEWDPYTR
PMMTEVEGTVHFEDVVDGISVLESTDESTGITKRQVIDWRSTPRGTDLKPAIVIKDKNGS
IAKLARGGEARFMLSVDAILSVEPGQKVSQGDVLARSPLESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTVRFGRDYKNKRRVLIEPAEDGVEPVEYLIPKGKPFHLQDGDYIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVEI
TDAGDSSYIVGDNVDRIELEDVNDALLAEGKKPAFGEPVLLGITKASLQTPSFISAASFQ
ETTKVLTEAAVAGKTDSLQGLKENVIVGRLIPAGTGGTMTQIRRIATARDELILEERRKG
TGADAATPMLADMANENAAAE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggtgcctgcacagaccttcgattcc
atccggatttcgatcgcgtcgccggagaagattctttcctggtcttacggtgagatcaag
aagccggagacgatcaactaccgcaccttcaagcccgagcgcgacggtctgttctgcgcg
cgcatcttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtgacgctgtcgcgcgttcgccgc
gagcgcatgggccatatcgagctcgccgcgcctgttgcccatatctggttcctgaagtcg
ctgccgagccgcatcgcgacgttgctcgacatgaccctgaaggatatcgagcgcgtcctc
tatttcgaaaactacatcgtcaccgaacctggcctgacgtcgctgaaggagaaccagctc
ctcagcgaagaagagtacatgatcgcggtcgacgagttcggcgaagaccagttcaccgcg
atgatcggcgccgaagcgatctacgagatgctcgcttcgatgaatctcgagaagatcgcc
ggtgatctgcgcgccgaaatggccgagacgagctcggatctgaagcagaaaaagctgatg
aagcggctgaagatcgtcgagaacttcatggagtccggcaaccgtccggagtggatgatc
atgaaggtcgttccggtgatcccgccggacctgcgtccgctcgtgccgctcgacggcggc
cgtttcgcgacgtcggatctcaacgatctctaccgtcgcgtcatcaaccgcaacaaccgt
ctgaagcggctgatcgaactgcgcgcaccgggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaatccgtcgatgcgctgttcgacaacggccgtcgcggccgcgtcatcaccggt
gccaacaagcgtccgctgaagtcgctctccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgcttggcaagcgcgtcgactattccggccgttcggtcatcgtgaccggt
ccggagctcaagctgcaccagtgcggtcttccgaagaagatggcgctcgaactcttcaag
ccgttcatctacgcccgcctcgacgccaagggcttctcctcgaccgtcaagcaggcgaag
aagctggtggaaaaggaaaagccggaagtctgggatattctcgacgaggtcatccgcgag
catccggttctgctgaaccgtgcgccgacgctgcaccgcctgggcatccaggccttcgag
ccgatcctggtcgaaggcaaggcgatccagctgcacccgctcgtctgcaccgccttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctcgaagcccagctt
gaagcccgcgtgctgatgatgtcgacgaacaacatcctgcatccggcaaacggcgcaccg
atcattgttccgtcgcaggacatggttctcggcctctactatctgtcgatcctgaaccag
aacgagccgggtgaaggcatggccttctccgacatgggcgaactgcaccatgcgctggaa
accaaggccgtcacgctgcacgccaagatccgcggccgctacaagaccgtcgatgccgag
ggcaacccggtctcgaagatctatgaaacgacgcccggtcgcatgatcatcggcgagctc
ctgccgaagaacccgaacattccgttcgagatctgcaaccaggagatgaccaagaagaat
atttcgaagatgatcgacacggtctatcgccattgcggccagaaggacacggtgatcttc
tgcgaccggatcatgcagctcggcttcgcccatgcctgccgcgccggcatttcgttcggc
aaggacgacatggtgatcccggacaccaaggtgaagatcgtcggcgacaccgaagcgctc
gtgaaggaatacgagcagcagtacaatgacggcctgatcacccagggcgagaagtacaac
aaggtcgtcgacgcctggggcaaggcaaccgaaaaggtcgccgaagagatgatggcgcgc
atcaaggcggtcgagtttgacgacaatggtcgccagaagccgatgaactcgatctacatg
atgtcgcactcgggtgctcgtggttctccgaaccagatgcgccagctgggcggcatgcgc
ggcctcatggccaagccgtcgggcgagatcatcgaaacgccgatcatctcgaacttcaag
gaaggcctgaccgtgaacgagtacttcaactcgacgcacggtgcccgtaagggtctggcg
gacaccgccttgaagaccgcgaactccggttacctgacccgccgtctcgtcgacgtcgcg
caggactgcatcgtcacgcatgtcgattgcggcaccgacaagggcctgaccatgacggcg
atcgtcgatgccggccaggtcgtcgcctcgctcggccagcgtatcctcggccgtacggcg
ctcgacaacatcgacaacccggtcaccggcgaacgcatcgtcgatgccggcaagatgatc
ctcgaggccgatgttgccacgatcgagaaggccggcattcagtccgtccgcattcgctcg
gcgctgacctgcgagatccagaccggcgtctgcggcgtctgctacggccgtgacctcgcc
cgcggtacgcccgtcaacatgggtgaagcggtcggtgtcattgcggcgcagtcgatcggt
gagccgggcacgcagctgaccatgcgtaccttccacctcggcggtacggcgaccgtggtc
gaccagtcgttcctcgaagcgtcctacgaaggcacggtccagatcaagaaccgcaacatg
ctgcgcaattccgatggcgtcctcgtcgccatgggccgcaacatggcgatccagatcctc
gacgaacgcggtgtcgagcgctcctcgcagcgcgttgcctacggttcgaagatcttcgtc
gacgacggcgacaaggtgaagcgcggccagcgtttcgccgagtgggacccctacacccgt
ccgatgatgacggaagtggaaggtaccgttcacttcgaagacgtcgtcgacggcatctcg
gttctggaatcgacggacgaatcgaccggcatcaccaagcgccaggttatcgactggcgt
tcgacgccgcgcggcacggacctgaagccggcgatcgtaatcaaggacaagaacggcagc
attgccaagctcgcccgcggcggcgaagcccgcttcatgctgtcggtcgatgcgatcctc
tcggtcgagccgggccagaaggtcagccagggtgacgttctcgcccgttcgccgctcgaa
agcgccaagaccaaggacatcaccggtggtctgccgcgcgttgccgagctcttcgaggca
cgccgtccgaaggatcacgccatcatcgccgagatcgatggcacggttcgcttcggccgc
gactacaagaacaagcgtcgcgtgctgatcgagccggccgaagacggtgtcgagccggtc
gagtacctgatcccgaagggcaagcccttccatcttcaggatggcgactacatcgaaaag
ggcgactacatcctcgacggcaacccggcgccgcacgacatcctggcgatcaagggcgtg
gaagcgctggcctcctacctcgtcaacgagatccaggaagtctatcgcctgcagggcgtt
gtcattaacgacaagcacatcgaggtgatcgtccggcagatgctgcagaaggtcgaaatc
accgacgccggtgactcgagctacatcgtcggcgacaatgtcgaccgcatcgagctcgag
gacgtcaacgacgcgctgcttgccgaaggcaagaagccggccttcggcgagccggtgctg
ctcggcatcaccaaggcatcgctgcagacgccgtccttcatctcggccgcgtcgttccag
gagaccactaaggtgctcacggaagcggcggttgccggcaagacggacagcctgcagggc
ctcaaggaaaacgtcattgtcggtcgcctcatcccggccggcaccggtggcacgatgacg
cagatccgccgcatcgccacggcgcgcgacgagttgatcctcgaagagcgccgcaagggt
acgggcgccgatgcggcgacgccgatgctcgccgacatggcgaacgaaaacgctgcggcc
gaatga
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integrated database retrieval system
