Sinorhizobium sp. CCBAU 05631: SS05631_c13460
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Entry
SS05631_c13460 CDS
T05069
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03410
Base excision repair
sino03430
Mismatch repair
sino03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SS05631_c13460
03430 Mismatch repair
SS05631_c13460
03440 Homologous recombination
SS05631_c13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c13460
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SS05631_c13460
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SS05631_c13460
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SS05631_c13460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASY56290
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Position
1295107..1296999
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AA seq
630 aa
AA seq
DB search
MPVAGRSAQPAGFSASKSSLERMNFGRTGSMDELADPIERAFLGVERSISGQRWVSRLDQ
AGQNRALAISQVHGYSELIARVLAGRGVGLDDAAQFLDPTLRALMPDPDALTDCRKAAER
LAGAIRRGEKVAIFGDYDVDGAASSALMLRFLRHFDVPAEIYIPDRIFEGYGPNPQAIEQ
LIGNGAGLIVAVDCGSTSHDSLAVAAERGIDVVVIDHHQVGAVLPPCHALVNPNREDDLS
GQGHLCAAGVVYLVLVNTLRVLRLEGNARAGSFDLLSLLDLVALATVCDVVPLKGLNRAY
VVKGLIAARHMVNSGLAALLRKAAIGGPVTPYHLGFLIGPRINAGGRIGDAALGSRLLTL
DDAAAAEVIASRLDELNRERQAMEAAMLAEAEAEVLAEYGTGEGASVIVTARENWHPGIV
GLIAARIKEKFRRPAFAIAFDPSGRGTGSGRSITGFDMGRLVRAAVDNGLLVKGGGHAMA
AGLTVERANLGRLRQFFEERAENPVRELVAVETLKVDGALAAAGATLDLVELLDQAGPYG
SAHPQPVFAFPQHRLRDSRQVGANHVKVTLEGHDGSRIDGIAFRATETPLGDFLLGNRGS
TVHVAGCVSSDLWQGTRRVQLRVTDAAKAS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgcgggccggagcgcccagcctgccggtttttccgcctcgaaatcttcgtta
gaacgaatgaacttcggacggacaggcagcatggacgaattggcggatccgatagagcgg
gcatttctcggcgtcgaacgctcgatcagcggtcagcgctgggtctcgcgcctcgatcag
gccgggcagaaccgggcgctggcaatcagccaggtgcacggctattcggagctcatcgca
cgggtgctggccggccgtggcgtcggcttggatgatgcggcacaatttctcgatccgacg
ctgcgcgcgctgatgcccgatccggacgcactgaccgattgccgcaaggccgcggagcgg
ctcgccggcgccatccgccggggcgagaaggtcgcgatcttcggcgattacgatgtcgac
ggtgcggcatcctccgcactgatgctgcggttcctgcgccatttcgacgttccggccgaa
atctatattcccgatcgcatcttcgagggatacgggccgaacccgcaggcgatcgagcaa
ctgatcggtaacggggccggtctgatcgttgctgtcgactgcggttctacaagccatgat
tcgctcgccgtcgctgccgaacgcggcatcgacgtggtcgttatcgatcatcaccaggta
ggcgcggtgctgccgccgtgccacgcgctcgtcaatccgaatcgcgaggacgatttgtcc
gggcaggggcatctctgtgccgccggcgtggtctatctggtgctcgtcaatacgttgcgg
gtgctgcggcttgaggggaatgcgcgtgccggcagctttgatctgctgtcactcctcgac
ctcgttgcgctcgccacggtctgcgacgtggttccgctcaaggggctgaaccgcgcctat
gtcgtcaagggattgatcgcggcgcggcatatggtcaatagcggcctggcagcccttctg
cgcaaggctgcgatcggtggcccagtgacgccttatcatctgggcttcctcatcgggccc
cgcatcaatgcgggcgggcggatcggcgatgcggccctcggcagccggctcttgacgctg
gacgacgcggcggcggccgaagtgatcgccagccggctcgacgagctcaaccgcgagcgg
caggcgatggaggcggcaatgcttgcagaggccgaggccgaagtgctggcggaatacgga
acgggcgagggggcctcggtgatcgtcaccgcccgggaaaactggcaccctggcatcgtc
ggcctgatagcggcgcgcatcaaggagaagttccgccgcccggcctttgccatcgccttc
gacccgagcggccgcggaacgggttccggccgatcgatcaccggattcgacatgggcagg
ctcgttcgtgcggccgtcgacaatggcctcctcgtcaaagggggtggacatgccatggcc
gccggcctgacggtcgagcgcgccaatctcgggcgattgcgccagtttttcgaggaacgc
gccgagaacccggtgcgggaactggtcgcggttgagaccctcaaggtcgacggcgcactg
gcagcggccggagcgacgctcgacctcgtcgaacttctcgaccaggcgggcccttacggc
tcggcccatccgcaaccggtcttcgcctttccccagcaccgtctgcgcgacagccgccaa
gtcggcgccaaccacgtcaaggtcacgctcgagggccacgacggcagccgcatcgacggg
atcgccttccgggcaacggaaacgccgctcggcgatttcctgctcggcaatcggggctcg
acagtgcacgtcgctggttgcgtttcgtcggatctctggcagggaacgcggcgcgtgcaa
ctgcgtgtgacggacgcggctaaggcaagctga
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