Sinorhizobium sp. CCBAU 05631: SS05631_c19240
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Entry
SS05631_c19240 CDS
T05069
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SS05631_c19240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c19240
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SS05631_c19240
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SS05631_c19240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
UB2H
Microtub_bd
SWI2_SNF2
DUF2963
Motif
Other DBs
NCBI-ProteinID:
ASY56856
LinkDB
All DBs
Position
1820770..1823817
Genome browser
AA seq
1015 aa
AA seq
DB search
MAQNPKNPPKKSAAPGGFEEAPQAPLSGAPLSGNVSDWVKQLEAEAETSAFESQREIASK
AGKHRKKVEIAASKAAADAEEKSAEGRKPERASELTQGPRGAKALRADSTSGKTFSGKTA
RGTSMGGSHDPKTRAAAGLNPVAGLDVALEDADKLTTGSGVTATVEALAKLIESGNPLFK
DGKLWTPHRPARPDKSEGGISLKMVTDYQPSGDQPTAIADLVDGLSSGERNQVLLGVTGS
GKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPENAVEYFVSYYDYYQPEAYVP
RSDTYIEKESSINEQIDRMRHSATRSLLERDDVVIVASVSCIYGIGSVETYTAMTFQMNV
GDRLDQRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDS
ITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLNAAIKAIKEELTHRLAELERAGRLLEA
QRLEQRTRYDLEMLEATGSCQGIENYSRYLTGRRPGEPPPTLFEYIPDNALIFIDESHVT
IPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPDTIAVSATPGSWELEQ
SGGVFAEQVIRPTGLIDPPVEVRSAKTQVDDVLGEIRETAAAGYRTLVTVLTKRMAEDLT
EYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDA
DKEGFLRSETSLIQTIGRAARNVDGKVILYADTITGSMSRAMEETARRREKQMAYNLENG
ITPESVKAKISDILDSVYERDHVRADISGVAGKGFAEAGHLVGNNLQAHLNALEKQMRDA
AADLDFETAARLRDEIKRLKAAELAVLDDPMAREEARSAEGGGKRGSKAAPSPISPPAGE
MSGRTEGGASTSYFAKPSLDDMGPGTDTERPLFRKPDLDEMGRDVAIPAGKGQSLFRKNT
LDEMTVGRTEKPVAGHVPEKPTLTRAKPGIGSYEDQADEKRQKGRTKGKTGRPGR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaatccgaagaatcccccgaagaaatcggcagcgcccggcggtttcgaagaa
gccccgcaggcgccgctttccggtgcgccgctctccggcaacgtctccgactgggtgaag
cagctcgaggcggaagcggaaacctccgctttcgaaagccagcgggagatcgcctccaag
gccggcaagcaccgcaagaaggtcgagattgccgcctcgaaagcggccgcggatgcggaa
gagaaatcggccgaaggccgcaagcccgaacgggcgtccgagctgacgcaaggcccccgc
ggagcgaaggcgctgcgcgccgacagtacgagcggaaaaactttcagcggcaagaccgca
cgcggcacttccatgggcggcagccacgacccgaagacgcgcgccgccgccgggctcaac
ccggtcgccggtctcgacgttgcactcgaggatgccgacaagctgacgacgggctccggc
gtcaccgccacggtcgaggcgctcgccaagctgatcgagagcggcaacccgctgttcaag
gacggcaagctctggaccccgcaccgccctgcccggccggacaagtcggaaggcggcata
tcgctgaagatggtgaccgactaccagccctccggcgaccagccgacggcgattgccgat
ctggtcgacggcctctcttcgggcgagcgcaaccaggtgctgctcggcgtcaccggctcc
ggtaagaccttcactatggccaaggtgattgaggcgacgcagcgcccggccgtcatcctg
gcgccgaacaagacgctcgccgcccagctctattccgaattcaagaacttctttccggaa
aacgcggtcgagtatttcgtctcctactacgactactaccagccggaggcctacgttccg
cgttccgacacctatatcgagaaggaatcctcgatcaacgagcagatcgaccgcatgcgc
cactcggcgacgcgctcgctgctcgagcgcgacgacgtcgtcatcgtcgcctcggtctcc
tgtatctacggtatcggctcggtcgaaacctatacggcgatgaccttccagatgaatgtc
ggcgaccgactcgaccagcggcagctcctcgccgacctggtggcgcagcagtacaagcgc
cgcgacatggatttccagcgcggctccttccgggtgcgcggcgacacgatcgagatcttc
ccggcccacctggaggatgccgcctggcgcatctccatgttcggcgacgagatcgactcc
atcaccgagttcgatccgcttaccggccagaagaccggcgacctgaaatcggtgaagatc
tacgccaactcacactatgtgacgccgcgcccgaccctgaacgccgccatcaaggcgatc
aaagaggagctgacgcatcgccttgccgagcttgaacgggccggccgcctgctcgaggcg
cagcggctggagcagcgcacccgctacgacctcgaaatgctggaagccaccggctcctgc
cagggtatcgagaactattcgcgctacctgaccggccgcaggccgggcgagccgccgccg
acgctgttcgaatatattcccgacaacgcgctaatcttcatcgacgagagtcatgtcacc
attccgcagatcggcggcatgtatcgcggcgacttccgccgcaaggcgacgctcgccgaa
tacggcttccgcctgccctcctgcatggacaaccgaccgctgcgcttcgaggaatgggac
gcgatgcgcccggacacgatcgccgtctcggcgacgcccggcagctgggaactggagcag
tccggcggcgtcttcgcggagcaggtgatccgcccgaccggcctgatcgacccgccggtc
gaagtacgctccgccaagacccaggtcgacgacgtgctcggagaaatccgcgagaccgct
gccgccggctaccgcacgctcgtcacggtgctgaccaaacgcatggccgaggacctcacc
gagtacctgcacgagcagggcgtgcgggtgcgctacatgcattccgacatcgacacgctg
gagcgcatcgagattatccgcgatcttcgtttaggtgctttcgacgtgctggtcggcatc
aacctgctgcgcgagggcctggatattcccgagtgcggcttcgtcgccattctcgacgcc
gacaaggaaggtttcctgcgttcggaaacctcgctgatccagacgatcggccgcgccgcc
cgcaacgtcgacggcaaggtcatcctctacgccgacaccatcaccggctcgatgagtcgg
gcgatggaggagacagcccgccgccgcgagaagcagatggcctataacctcgaaaacggc
atcacgccggaatcggtgaaggcgaagatctccgacattctcgactcggtctacgagcgc
gaccacgtccgcgccgacatctccggcgtagccggcaagggctttgccgaggccggccac
ctcgtcggcaacaatctgcaggcgcatctcaatgcgctggaaaaacagatgcgcgacgcc
gccgccgacctcgacttcgaaaccgccgcgcggctgcgcgacgagatcaagcgcctcaag
gcggccgagttggccgtgctggacgacccgatggcaagggaagaggcgaggagcgccgag
ggcggcggcaagcggggcagcaaggccgcgcccagcccgatctccccccctgcgggggaa
atgtccggcaggacagaggggggggcttccacgagctatttcgccaaaccctcgctcgac
gacatgggcccgggtaccgataccgagcgccccctcttccgcaaaccggacctcgacgaa
atgggccgtgatgtggctatccccgcgggcaagggtcagtcgctgttccgcaagaatacc
ctcgacgagatgaccgtcggccgcaccgaaaagccggttgctggccacgttccggaaaag
cctaccctcacccgcgccaaaccgggcattggctcctatgaggaccaagcggacgagaag
cggcagaagggccgaacgaaaggaaaaacggggcggccggggcggtaa
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integrated database retrieval system
