Sinorhizobium sp. CCBAU 05631: SS05631_c27130
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Entry
SS05631_c27130 CDS
T05069
Name
(GenBank) Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family)
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
sino
Sinorhizobium sp. CCBAU 05631
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sino03000
]
SS05631_c27130
Transcription factors [BR:
sino03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SS05631_c27130
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
DinI
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ASY57642
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Position
2595158..2596090
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AA seq
310 aa
AA seq
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MELRQLRYFLAVARERNFSRAAGILHIAQPPLSRQIQQLEDELGVLLIDRSSRPLDLTEA
GRFFYEQAGQIIARTEHMREQTRKIGLSKRERYVIGCVGSTLYGGMPDLVRRMRRRWPDL
DIEIREMMSTEQVTALKERRIDLGFGRVRFNDREVERLTLREERLVVAFPKGHPKSVSTE
PIALAELEGEPLIVYPSAPRPSFADEVLNMLSEQGISPGSVEEVREIQTALGIVAAGMSL
CVIPAASQRQRPDDVCYRTIKDENATSPIIMSFRRDDAKGRVEEIKQLIREMYADNPPWL
QLSNVQLDGA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaggcagctgcgctattttcttgccgtcgcgcgcgagcggaacttctcgcgt
gcggcgggaatcctgcatatcgcgcagccgcctctcagtcggcagatccagcaattggaa
gacgaactcggcgttctgctgatcgaccggtcgagccggccgctcgatctgaccgaggcc
ggtcgcttcttctacgagcaggccggacagatcattgcccggaccgagcatatgcgcgag
cagacgcgcaagatcggcctgtcgaaacgcgagcgttacgtcatcggctgcgtcggctcg
accctttatggcggcatgccggacctggtccgccgcatgcgccggcgctggccggatctc
gacatcgaaatccgggaaatgatgtcgaccgagcaggtcacggccctcaaggagaggcgg
atcgatctcggcttcggccgggttcgcttcaacgacagggaggtcgagaggctgacgctg
cgggaggaacgactggtcgtcgcctttccgaaggggcatccgaaatcggtatcgaccgag
ccgatcgcgctcgccgaactggagggggaaccgctcatcgtctatccctcggctccgcgc
ccgagctttgccgacgaggtcctcaacatgttgtccgaacagggcatttcgcctggcagc
gtggaagaggttcgcgaaattcagaccgcattgggcattgtggcggccggaatgagcctg
tgcgtcattcccgcggcgtcgcagcggcaaaggcccgacgacgtgtgctatcgcaccata
aaggacgagaacgccacctcgccgatcatcatgagcttcaggcgcgacgacgcgaaaggc
cgggtcgaagagatcaagcagctcattcgcgaaatgtacgccgacaacccgccctggctg
cagctctccaacgtgcaactcgacggtgcatga
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