Sinorhizobium sp. CCBAU 05631: SS05631_c34170
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Entry
SS05631_c34170 CDS
T05069
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sino03032
]
SS05631_c34170
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c34170
Enzymes [BR:
sino01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SS05631_c34170
DNA replication proteins [BR:
sino03032
]
Prokaryotic type
DNA Topoisomerases
SS05631_c34170
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SS05631_c34170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
ASY58331
UniProt:
A0A249NX93
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All DBs
Position
3279322..3280491
Genome browser
AA seq
389 aa
AA seq
DB search
MPLQVISNPTRQAAAMRRGGGRSRNSGGPAPGEARPKESGLVYVSDSEPGIRRQRAGKGF
VYRLPDGSVLTDPAVKARIASLGLPPAYEKVWICLDENGHLQATGYDVRGRKQYRYHTEW
QALRSGDKFAQLLLFGKALPRIRRTVRRHMEGGTGDARTVLAALVALLDEVHLRTGSPAY
VQANSTYGATTLLKRHLRLLDGSIELRFTAKGGKRVQRRLRRPKLQRLLEDIADLPGRQL
FVWRDDNDILRPVDSGRLNRYLAEVAGFPVSAKTFRTWAGSVAAFTAAREAMDKGKRPTV
REMCEAAAETLCNTPAICRKSYIHPDIIALAGAASAASASKLSRRGRANPELRVEEARML
NFLVRAARAERQANASMNGVAAGLTAPSV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcaagtcatttccaatccgacccgccaggccgcggccatgcggcgcggcggc
gggcgcagccgcaacagcggcggtccggccccaggcgaggcccggccgaaggaaagcggg
ctcgtctatgtcagcgattcggagccgggcatcagacgccaacgcgccggcaagggcttc
gtctatcggctgccggacggctccgtcctgaccgatcctgccgtgaaggcccgtatcgcc
tcgctcggcctgccacccgcctacgagaaggtgtggatctgcctggatgagaacggccac
ctgcaggcgaccggctacgacgtacgcggtcggaagcaataccgctaccacacggaatgg
caggcgctgcgaagcggcgacaaatttgcccagctccttctgttcgggaaggcgctgccg
aggatccggcgcacggtccgccggcacatggaaggcggaaccggcgacgcacgaacggtc
ctcgccgcgcttgtcgcgctcctcgacgaagtgcatctccggacgggaagtcccgcctat
gtccaggcgaattcgacctatggcgcgacgacgcttttgaaacgccatttacggctcctc
gacggcagcatcgaactgcgctttaccgccaagggcggcaagcgcgtgcagaggcggctg
cgccgcccgaagctgcaacgcctgctcgaggacatcgccgacctgccgggacggcagctc
ttcgtgtggagggacgacaacgacatactgcgccccgtcgactcgggtcgtctcaaccgc
tatctggcggaggtggcgggttttccggtttcggccaagacattccgaacctgggcgggc
agcgttgccgccttcacggccgcccgcgaggcgatggataaagggaagcgcccaacggtc
agagaaatgtgcgaggcggccgccgagaccctctgcaacacgccggcaatctgccgcaaa
agctacatccatccggacatcattgcgctcgccggcgctgccagtgcagcctccgccagc
aagctcagccgccgagggcgggctaacccggaactccgggtcgaggaagcgcgcatgctc
aatttccttgttcgcgccgcacgcgcggagcggcaggccaacgcctctatgaacggagtg
gcggcgggcctaacagcgccgagcgtctaa
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