Sinorhizobium sp. CCBAU 05631: SS05631_c38050
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Entry
SS05631_c38050 CDS
T05069
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c38050
Enzymes [BR:
sino01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SS05631_c38050
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SS05631_c38050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASY58717
LinkDB
All DBs
Position
complement(3677327..3680896)
Genome browser
AA seq
1189 aa
AA seq
DB search
MRNEAFGPEERTPKAWLDWTTERQSLASDPARSAWVSANAGSGKTHVLTQRVIRLLLSGC
RPSAILCLTYTKAAASEMSNRIFERLAEWATLDDAALEKRIETIEGTRPSLAKIEEARRL
FAKALETPGGLKIQTIHAFSEALLHQFPLEANVAGHFSVLDDRAAAVLLSDARRALLTAT
AAEDESELADAFATVLDLADDTGLEKLLEAIVANRAAIQAFLDSAAVKGGREKHLRAALG
LASGETAASVMAGAWPLAGLNGAALQRYIELALSLGGVKPGEIAEGLKAAREAADAEERF
AGLLGVFFNGGGKPKADSAFFNKAMLAQAPELAPLIEEARKHITTCADRLSIVRMYEATR
AALILAERLNRDYEDLKKRRSQLDFEDLINRTAALLSRSDVGAWVHYKLDQGIDHILIDE
AQDTSPAQWTIIQALAADFFAGETARANERTIFAVGDEKQSIYSFQGARPERFSRESIQT
ERRVRAGSKYFSPIRLQLSFRSTVDVLSAVDTVFANPGNAKGLSARSEAIVHASNRIGHP
GAVDIWDIIAPEPVSSEEDWTAPFDATPERAPVNILARRIAAVLEDWIGKETVIEKGARR
PMRPGDVIVLVRKRDAFVNALTRALKRRGNIPVAGADRLVLTNHIAIQDLLALGRFVLLP
EDDLSLAALLKSPLVDLGEDDVFELAARRAEGESLWRRLQQLGAEESSRYHRVVRMLAGY
GELARNLLPHDFYARVLGANGGRRAFLARLGSEVSDILDEFLTFALDHERSGLPGLQAFV
STLEIEAPTVKREQDKERDEVRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQVSDLRFLEK
PQADGSMLGVPVWRAPGSASNSLIAADNERLKRLAEEEYRRLLYVGMTRAADRLIVCGYR
GQRQNLDTWHAMVQGTLAHDPKGRATPMVFSAGGEEWTGHAWREARVPVAVPVREDSESK
PPATASSLPRALFTPLPPQRRLPRPLAPSGTSVAIDDPEQETIVGSALFAAQTAPKFSML
RGAILHRLLQVLPTIDGAERRDAAERYLSRAVPRWPETERQALSRAVMEVLEHPDLQPLF
GEQSRAEVSVMGTLKLGSQEFAVSGRLDRLAVAGDTVTIADYKTNRQVPASVAEIPTVYR
RQLAIYRELLRPLYPGKQFRCVLIFTEGPAVWVLPDPMLDGSLEELATK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgaggctttcggcccggaggagaggacgcccaaggcgtggctcgactggacc
accgagcggcaatcgcttgcctcggatccggcgcgctcggcctgggtttcggccaatgcc
ggctcgggcaagacgcatgtgctgacgcagcgcgtcattcggctgctgctttccggctgc
cgcccttccgccattctctgcctgacctatacgaaggcagccgcctcggagatgtcgaac
cgcatcttcgagcgtctcgccgaatgggcgacgctcgatgatgccgctctggaaaagcgc
atagagacgatcgagggcacgcgaccctccctcgccaagattgaggaggcgcggcggctc
tttgccaaggcgctcgaaacgccgggcgggttgaagatccagacgattcacgccttctcg
gaagcgctgctccatcagtttccactcgaggcgaacgtggcgggacacttttccgtcctc
gacgatcgggccgcggcggtgctgctttccgatgcgcgccgcgccctgctgacggccacc
gccgccgaggacgagagcgagcttgcagatgccttcgccaccgtcctcgacctcgccgac
gataccggccttgaaaagctgttggaggcgatcgtggcgaaccgcgcggcgatccaggcc
tttctcgatagcgccgccgtaaaaggcgggcgggagaagcacctgcgagccgcgctcggt
cttgcgtcgggggagacggccgcgagcgtgatggccggagcctggccgcttgccggcctc
aacggcgcggcgcttcagcgctatatcgagctcgcgctgagccttggcggagtgaaaccc
ggggagatcgcagagggcttgaaggcggcccgcgaggccgccgatgcggaggagcgcttt
gccgggcttctcggcgtgtttttcaacggcggcggcaagccgaaggcggattcggccttc
ttcaacaaggcaatgctggcgcaggcgcctgaactggcgccgctcatcgaagaggcgcgc
aagcacatcacaacctgcgccgaccggctcagcatcgtccggatgtacgaggcgacgcgc
gcggcgctgatcctcgccgaacggctcaacagggactacgaagacctcaagaagcggcgc
agccaactcgatttcgaggacctgatcaaccgcacggctgcgctgctttctcgcagcgat
gtcggcgcctgggtccattacaagctcgaccagggcatcgaccacattctcatcgacgag
gcccaggacacgagccccgcccaatggacaatcatccaggcgctcgccgccgatttcttc
gccggcgaaacagcgcgcgccaacgagcggacgatctttgcggtcggggacgaaaagcag
tcgatctactccttccagggcgcgcgtcccgagcgattctcgcgcgaaagcatccagacc
gaacggcgggtgcgcgccggaagcaagtatttcagccccatccggctgcagctctccttc
cgttcgacggtcgacgtgctttccgccgtcgacacggtctttgccaatccgggcaatgcg
aagggcttgagcgcccgcagcgaggcgatcgtgcacgcctcgaaccggatcggacacccc
ggcgccgtcgacatctgggacatcatcgcgcccgagccggtgagctccgaagaggattgg
acggcgcccttcgatgcgacgccggagcgggctccggtgaacattcttgcccggcgcatc
gcggccgtgctcgaggactggatcggcaaggagacggtgatcgaaaagggcgcccgacgc
ccgatgcgacccggcgacgtcatcgtgctggtgcgcaagcgcgacgccttcgtcaatgcc
ctgacgcgtgcactcaagcgccgcggcaatattccggtcgcaggcgccgaccggctcgtg
ctcaccaaccatatcgccatccaggatctcctggcgctcggccgtttcgtgctgctgccc
gaggacgatctgtcgctcgcggcgctgctgaagagcccgctcgtcgatctcggcgaggac
gatgtcttcgaactcgcggcacgccgggccgagggcgaaagtctctggcgacggctgcaa
cagctcggcgccgaggaatcaagccgatatcatcgggtcgtgcggatgctcgccggctat
ggcgagcttgcccgcaacctgctgccgcacgacttctatgcccgcgtgctcggcgccaat
ggcggccggcgcgccttcctggcgcggcttggcagcgaggtaagcgatatcctcgacgaa
ttcctgacctttgcgctcgaccatgagcggagcgggctgcccggcctgcaggccttcgtc
tcgacgctcgagatcgaggcgccgacggtcaagcgcgagcaggacaaggaacgcgacgag
gttcgcgtcatgaccgtgcacgccgccaagggcctcgaggcaccggtcgtctttctggtc
gacggcggcggcgaagcattcgtccgtcagcaggtctcggacctccgcttcctggagaag
ccccaggcggacggctcgatgctcggggtgcccgtctggcgcgctcccggctcggcgtcg
aattcgctgatcgccgccgacaacgagcggctgaagcgcctggccgaggaagaatatcgc
cgcctcctctatgtcggcatgacgcgcgcggcggaccggctgatcgtctgcggctatcgc
ggccagcggcagaacctcgatacctggcatgcgatggttcaaggcacattagcgcatgat
ccgaagggccgggcgacgccgatggtcttttcagccggcggcgaggaatggacgggccat
gcctggcgcgaagcgcgtgtgccggtcgccgtcccggtacgcgaggactcggagagcaag
cctccggcgacggcatccagcctgccgcgggcactcttcacccccttgccgccgcagcgc
cggctgccgcgaccgctcgccccttcgggaacgagcgtggcgatcgacgatccggagcaa
gagacgatcgtcggctcggctctctttgcggcacagacagcgccgaagttctcgatgctg
cgcggtgcgatcctgcatcggctgctgcaggtgctgccgacgatcgacggcgccgagcgc
cgggacgcggcggagcgttacctcagccgggccgtgccacgctggccggagacggagcgg
caggcacttagccgtgccgtgatggaggtgctcgagcatccggatttgcagccgctcttc
ggcgaacagagccgcgcagaagtctccgtcatgggaacgctcaagctcggcagtcaggaa
ttcgccgtatccggccggctcgaccgcctggcggttgccggcgacaccgtgacgatcgcc
gattacaagaccaatcgccaagtgccggcctcggtcgccgaaattccgaccgtctaccgg
cggcagctcgcaatctaccgcgaactcttgaggccgctctatcccggcaagcaattccgt
tgcgtgctgatcttcaccgaaggcccggccgtgtgggtgcttcccgacccaatgctggac
gggagccttgaagagctcgcgacaaagtga
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