Sinorhizobium sp. CCBAU 05631: SS05631_c39470
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Entry
SS05631_c39470 CDS
T05069
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03030
DNA replication
sino03410
Base excision repair
sino03420
Nucleotide excision repair
sino03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS05631_c39470
03410 Base excision repair
SS05631_c39470
03420 Nucleotide excision repair
SS05631_c39470
03440 Homologous recombination
SS05631_c39470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sino03032
]
SS05631_c39470
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c39470
Enzymes [BR:
sino01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SS05631_c39470
DNA replication proteins [BR:
sino03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SS05631_c39470
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SS05631_c39470
NER (nucleotide excision repair)
GGR (global genome repair) factors
SS05631_c39470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HV_Gp350_C-term
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
ASY58853
UniProt:
A0A249NYS3
LinkDB
All DBs
Position
3826080..3829094
Genome browser
AA seq
1004 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVT
PTHFAVIFDYSSKTFRNTLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEA
DDLIATYARLAEEAGAGVTIVSSDKDLMQLVTANVSMYDSMKDKQITIPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLSRAGEIKQQKRREAIIANA
EKARLSRELVTLKKDTPLDVPLEDLRLDSQDGPRLIAFLKTMEFNTLTRRVAAATETDAE
AIEPAHVPVEWGAEAHGPDLDVGEAAGPPPTPASSSASPPRGTAAKAAVSFLTGKGDAYV
TGATPQELAQARADYFAKAPFDHSAYVTIRDLATLDRWIADAREAGVLGFDAETNSLDPM
RAELVGLSMAFADYGNNPLGGTIRAAYVPLIHRNGVSDLLGGGMVENQVPAREALSRLKV
LLEDPSVLKVAQNLKYAYLVMKRHGIVLQSFDDTMLMSYVVDAGNGGHGMDSLSERWLGH
VPIPYKDVTGTGKASVSFDFVDIDKATAYAAEDAEVTLRLWHVLKPRLAAKGLTRVYERL
ERPLVAVLAQMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDI
LFGKMGLPGGSKTKTGQWSTSASVLEELAAVGHELPRKIVDWRQLTKLKSTYTDALPGFV
HPETKRVHTCYALAATTTGRLSSSEPNLQNIPVRTTEGRKIRTAFIATPDHRLVSADYSQ
IELRVLAHVAEIPQLRQAFADGVDIHAMTASEMFGVPVEGMPSEIRRRAKAINFGIIYGI
SAFGLANQLSIERSEAGEYIKRYFARFPGIRDYMENTKAFAREHGYVETIFGRRAHYPDI
RSSNPSHRAFNERAAINAPIQGSAADIIRRAMVKMEPALEAAKLSARMLLQVHDELIFEV
EESEIERTLPVIVSVMENAAMPALNMKVPLKVDARAAQNWDEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggtgatcatctcttcctcgtcgacggctcgggcttcatcttccgggcgttc
cacgccatcccgccgctcaaccgcaagtcggacgggcttccggtcaatgcggtggcaggc
ttctgcaacatgctctggaagttgctgaccgatgcgcgcgacacgtcggtcggcgtgacg
ccgacccatttcgcggtgatcttcgattattcctccaagaccttccgaaacacgctttac
gaccagtacaaagcgaaccgcacggcgccgccggaggacctgatcccgcaattcgggctg
atccgccacgccacccgcgccttcaacctgccctgcatcgagaaggaaggctacgaggcc
gacgacctgatcgccacctatgcgcggctcgccgaggaagcgggcgccggcgtcaccatc
gtttcctccgacaaggacctcatgcaattggtgaccgccaatgtgtcgatgtacgacagc
atgaaggacaagcagatcaccattcccgacgtcatcgagaaatggggcgtgccgcccgag
aagatgatcgacctccaggcgatgaccggcgattccaccgacaatgttccgggcattccc
ggcatcggcccgaagacggcggcccagctcctcgaagaatatggcgacctcgacacgctg
ctttcgcgggccggcgagatcaagcagcagaagcggcgcgaggcgatcatcgccaatgcc
gagaaggcgcgcctgtcgcgcgagctcgtcaccctgaagaaggacacgccgctcgacgtg
ccgctcgaggatctgcggctcgattcgcaggacggaccgaggctgatcgccttcctgaag
acgatggaattcaacactttgacgcgccgcgtcgccgcggcgaccgagacggatgcggag
gcgatcgaaccggcgcatgtgccggtcgaatggggcgccgaggcgcacgggcccgatctc
gacgtcggcgaggcggccggtccgccgccgacgccggcatcgtcgagcgcttcgccgccg
cgcggcactgccgccaaggctgcggtttccttcctcacgggcaagggtgacgcctatgtc
accggagcgacgccccaggagctggcgcaggcgcgcgccgactatttcgccaaggcgcct
ttcgaccattcggcctatgtgacgatccgcgatctcgcaaccctcgaccgctggatcgcc
gatgcccgtgaggcgggcgtcctcggtttcgatgcggaaaccaactcgctcgacccgatg
cgggcggagctcgtcggcctttcgatggcgtttgccgattacggcaacaatcccctgggc
ggtaccatccgcgccgcctatgtgccgctgatccacaggaacggcgtcagcgatcttctg
ggcggtggcatggtggaaaaccaggtgccggcgcgcgaggcgttgagccggctaaaggtc
ctgctggaagacccgtcggtgctcaaggtcgcccagaacctgaaatacgcctatctggtc
atgaagcggcacggcatcgtcctgcagagcttcgacgacaccatgctgatgtcctatgtg
gtcgatgccggcaatggcgggcacggcatggattcgctttccgagcgttggctcggccac
gtgcctattccctacaaggacgtcaccggcaccggcaaggcgtcggtgagcttcgatttc
gtcgacatcgacaaggcgaccgcctatgccgccgaggacgcggaggtgacgcttcgtctc
tggcatgtattgaagccgcggctggccgccaagggcctgacgcgcgtctatgaacgcctc
gaaaggccgctggtcgctgtcttggctcagatggaggagcgcggcatcaccgtcgaccgc
cagatcctctcgcgcctttcgggcgaactggcgcagggcgccgcagcgctcgaagacgag
atctaccggctggccggcgaaaccttcaccatcggctcgccgaagcagctcggcgacatc
ctgttcggcaagatgggcttgccgggcggctcgaagacgaagaccggtcaatggtcgacc
tccgcttcggtgctcgaagagcttgccgccgtcggacacgaactgccgcgcaagatcgtc
gactggcgccagctcaccaagctgaaatcgacctacaccgacgccttgcccggcttcgtg
catccggagacgaagcgcgtccacacctgctacgcgctcgccgccaccacgacggggcgg
ctttcctcctccgagccgaacctgcagaatattccggtgaggactaccgagggccgcaag
atccggactgccttcatcgcgaccccggaccacaggctggtgtcggccgattacagccag
atcgagctgcgggtcttggcgcatgtggccgagattccgcagcttcgccaagcctttgcc
gatggcgtcgacatccatgcgatgaccgcatcggagatgttcggcgtgccggtggagggg
atgccgagcgagatccgccgccgcgccaaggcgatcaatttcggcatcatctacggcatc
tcggcctttgggctcgccaaccagctttcgatcgagcgctcggaagcgggcgagtacatc
aagagatatttcgcgcgcttccccggcattcgcgactatatggagaacaccaaggctttt
gcccgcgagcacggctatgtcgaaacgatcttcggccgccgcgcccactacccggatatc
cgctcctccaatccctcgcaccgcgctttcaacgagcgcgcggcgatcaacgcgccgatc
cagggctcggccgccgacatcatccgccgggcgatggtgaagatggaaccggcgctggaa
gcggcgaagctttccgcccgcatgctgctccaggtccacgacgaattgatcttcgaggtc
gaggagagcgaaatcgagcgcactcttccggtgatcgtctcggtgatggagaatgccgca
atgccggcgctcaacatgaaggtgccgctgaaggtcgacgcgcgcgccgcgcagaattgg
gacgaggcgcattag
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