Sinorhizobium sp. CCBAU 05631: SS05631_c40100
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Entry
SS05631_c40100 CDS
T05069
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS05631_c40100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sino03019
]
SS05631_c40100
03016 Transfer RNA biogenesis [BR:
sino03016
]
SS05631_c40100
Enzymes [BR:
sino01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SS05631_c40100
Messenger RNA biogenesis [BR:
sino03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SS05631_c40100
Transfer RNA biogenesis [BR:
sino03016
]
Prokaryotic type
tRNA degradation factors
SS05631_c40100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ASY58915
LinkDB
All DBs
Position
3885469..3887631
Genome browser
AA seq
720 aa
AA seq
DB search
MFETHKVEIEWAGRPLKLETGKIARQADGAVLAIYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVIVTVMQH
DLENNPDVVSMVAASAALTLSGIPFMGPIGGARVGYINGQYVLNPHLDEMEESTLDLVVA
GTQEAVLMVESEAKELPEDVMLGAVVFGQKGFQPVIDAIIKLAEVAAKEPREFEPEDHSA
LENAMLSIAEDELRNAYKITEKAARYAAVDAVKAKVKEHFLPEGIENPAHSAEEIASVFK
HLQAKIVRWNILDTQSRIDGRDLVTVRPIVAEVGLLPRTHGSAIFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKENFMLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDDRFAVL
SDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIEGITEEIMGVALNQAKGGRLHILGEMA
KAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSSGKEIEAARKWIHSIVAEPEVGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEIVAEKGDKSDKKDGGEAAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagacccacaaggtagaaatcgaatgggctgggcgtccgctcaagctcgaaacc
ggcaagatcgcccgccaggcggacggcgccgttctcgccatctacggcgaaaccgtcgtc
ttggccacggttgtttccgccaaggcgccgaagcccggtcaggacttcttcccgctgacc
gtcaactaccaggaaaagacctatgccgccggcaaaatccccggcggttactttaagcgt
gaaggccgtccgagcgaaaacgagacgctcgtctcgcgcctgatcgaccgtccgatccgc
ccgctcttcccggaaggctacaagaacgacacccaggtgatcgtcacggtcatgcagcat
gaccttgaaaacaacccggacgttgtctcgatggtggccgcctctgcggcgctgacactc
tccggcattcccttcatgggcccgatcggcggcgcccgcgtcggctacatcaacggccag
tacgtgctcaatccccacctcgacgagatggaggaatcgacgctcgatctcgtcgtcgcc
ggcacccaggaagccgtgctgatggtcgagtccgaagccaaggagctgccggaagacgtc
atgctcggcgccgtggttttcggccagaagggcttccagccggtcatcgacgcgatcatc
aagctcgccgaagtagccgccaaggagccgcgcgagttcgagccggaagaccattccgcg
cttgaaaacgccatgctttcaatcgccgaggacgagctgcgcaacgcctacaagatcacc
gagaaggccgcacgctatgccgccgtcgacgccgtcaaggccaaggtgaaggagcacttc
ctgccggaaggcatcgagaacccggcccactcggccgaggaaatcgcctctgtcttcaag
cacctgcaggccaagatcgtccgctggaacatcctcgacacccagagccgcatcgatggc
cgcgacctcgtcacggttcgcccgatcgtcgccgaagtcggccttttgccgcgtacccac
ggctcggcgatcttcacccgcggtgaaacgcaggcgatcgtcgtcgccacgctcggcacc
ggcgaagacgagcagtatgtcgattccttgaccggcatgtacaaggaaaatttcatgctg
cactacaacttcccgcccttctcggtcggcgagacgggccgcatgggttctccgggccgc
cgcgaaatcggccacggcaagctcgcctggcgcgccatccacccgatgctgccgacggcg
gagcagttcccctatacgctgcgcgtcgtttccgaaatcaccgagtcgaacggctcctcc
tcgatggcaaccgtctgcggcacctcgctggcactgatggatgcgggcgtgccgctcgcc
aagccggtcgccggcatcgccatgggcctgatcaaggaagatgaccgcttcgccgttctc
tccgacattctcggtgacgaggaccatctcggcgacatggacttcaaggtggccggtacc
gaagccggtatcacctcgctgcagatggacatcaagatcgagggcatcaccgaagagatc
atgggcgttgcgctcaaccaggccaagggtggccgcctgcacattctcggcgaaatggcc
aaggccatttccgagagccgcggccagctcggggaattcgcgccgcgcatcgaggtgatg
aacattccggtcgacaagatccgcgaagtcatcggctcgggcggcaaggtcatccgcgaa
atcgtcgagaaaaccggcgccaagatcaacatcgaggacgacggcaccgtcaagatcgct
tcgtcgtcgggcaaggagatcgaggcggcgcggaagtggatccactcgatcgtcgccgag
ccggaggtcggccagatctatgagggcacggtcgtcaagaccgccgatttcggcgccttc
gtcaacttcttcggcgcccgtgacggcctcgtccacatttcgcagctcgcctccgagcgc
gtcgccaagacgaccgatgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggc
tttgacgagcgcggcaaggtccgcctctccatgaaggtcgtcgaccaggcgaccggcaag
gagatcgtcgccgaaaagggcgacaagtccgacaagaaggacggcggcgaagcggccgaa
taa
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