Sinorhizobium sp. CCBAU 05631: SS05631_c41560
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Entry
SS05631_c41560 CDS
T05069
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sino
Sinorhizobium sp. CCBAU 05631
Pathway
sino03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sino00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SS05631_c41560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sino03400
]
SS05631_c41560
Enzymes [BR:
sino01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SS05631_c41560
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SS05631_c41560
DNA repair and recombination proteins [BR:
sino03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SS05631_c41560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ASY59059
UniProt:
A0A249P176
LinkDB
All DBs
Position
4015252..4016142
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPDNFAAAVSGRRIVALSRRAKYL
MIDLEGGDVIVAHLGMSGSFRIETGAAPATPGAFHHPRGKDQKHDHVVFHLDGHSGRARV
IYNDPRRFGFMDLARRDTIAEHAFFRGLGEEPTGNALDATYLAQRFVGRAQPLKAALLDQ
KTIAGLGNIYVCEALWRSGLSPKRAAGTLVDKRGRPRKTLSALVEAIRAVIADAIAAGGS
SLKDHIQADGSLGYFQHAFSVYDREGEACRKPGCGGTVARIVQAGRSTFHCPRCQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcctgaggtcgagacggtcaaacgcgggttggcgccgacgatggagggg
gcgctgctggtgcgcgccgaattgcgccggccggacttgcgctttccctttcctgacaat
ttcgccgccgccgtgtcgggccggcgcatcgttgcgctctcgcgccgcgccaaatatctg
atgatcgatctcgagggcggcgatgtcatcgtcgcgcatctcggcatgtccggatcgttc
cggatcgaaaccggggcggcaccagccacgcccggcgcgttccatcatccgcgtggcaag
gaccagaagcacgaccatgtggtcttccatctcgacggacactccggccgggcgcgggtg
atctacaatgatccgcgccgcttcggcttcatggatctggcacgccgcgacacgatcgcc
gagcatgccttcttccgcggcctcggggaggagccgacgggaaatgccctcgacgccacc
tatctggcccagcgcttcgtcggcagggcgcagccactgaaagcggcgctcctcgatcag
aagaccattgccgggcttggcaatatctatgtgtgcgaggcgctgtggcgctcgggcctg
tcgccgaaacgcgcggcgggcacgctcgtcgacaagcgcggtcgtccgagaaagaccttg
tccgcacttgtcgaggcgatccgggcggtgatcgccgatgcgatcgcggccggcggttct
tcgctcaaggatcatatccaggcggatggcagcctcggctatttccagcacgccttctcc
gtctatgaccgggagggcgaggcttgccgcaagccgggctgtggcggtacggtcgctcgc
atcgttcaggcggggcgttcgaccttccattgcccgcgctgccagaaataa
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