Sinirhodobacter sp. HNIBRBA609: O5O51_00130
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Entry
O5O51_00130 CDS
T08716
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Pathway
sinr00521
Streptomycin biosynthesis
sinr00523
Polyketide sugar unit biosynthesis
sinr00525
Acarbose and validamycin biosynthesis
sinr00541
O-Antigen nucleotide sugar biosynthesis
sinr01100
Metabolic pathways
sinr01110
Biosynthesis of secondary metabolites
sinr01250
Biosynthesis of nucleotide sugars
Module
sinr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
O5O51_00130 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
O5O51_00130 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
O5O51_00130 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
O5O51_00130 (rfbB)
00525 Acarbose and validamycin biosynthesis
O5O51_00130 (rfbB)
Enzymes [BR:
sinr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
O5O51_00130 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WBL33149
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All DBs
Position
26093..27139
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AA seq
348 aa
AA seq
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MKILVTGGAGFIGSAVVRLAIARGHSVVNLDALTYAACLDNLASVAQSPRYAFEHADIRD
PVALEAIFRRHAPDAVLHLAAESHVDRSIDGPGVFVDTNVTGTMILLQAARSYWERSGRP
EHFRFHHVSTDEVFGSLPPDPAAKFTEDSPYDPRSPYAASKAASDHLVRAWHETFDLPVL
LTNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGTGAQIRDWLYVEDHAEALLLVLEKG
RPGRSYNIGGENERTNLQLVQSLCAILDDRRPGARPFADQIAFVADRPGHDARYAIDPTR
IRTELGWRPSVSVEEGLARTVDWYLTHEPWWRALHRRRGVGQRLGVVA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccttgttaccggtggcgccgggttcatcggttcggcagtggtgcggcttgcc
atcgcgcggggccattcggtggtcaatctcgacgcgctgacctatgccgcctgcctcgac
aacctcgcctcggtcgcgcaaagcccgcgctacgcgttcgagcacgcagacattcgcgac
ccggtggcgcttgaggcgatctttcgccgccatgcccccgatgcggtgctgcatcttgcc
gccgaaagccacgtggatcgctcgatcgacgggccgggcgtgttcgtcgacacgaatgtc
accggcacgatgatcctgctgcaagccgcacgtagctattgggaacgctctggccgcccc
gagcatttccgctttcaccatgtatcgaccgatgaggtcttcggctcgctcccgcccgac
ccggcggcgaagttcaccgaagacagcccctatgatccgcgctcgccctacgcagcgtcc
aaggccgcgtcggatcatctggtgcgcgcctggcacgaaaccttcgacctgccggtgctg
ctgaccaattgttcgaacaattacgggccgttccacttccccgaaaagctgatccccgtg
atcatcctcaacgccctcgcgggcaaaccgctgccgatctatggcactggcgcgcagatc
cgcgactggctttacgtcgaggaccacgccgaggcgctcttgctggtgcttgaaaagggc
cgcccgggccgcagctacaacatcggtggagagaatgagcgcacgaaccttcaacttgtc
cagtcgctctgtgcgatcctcgatgatcgtcgccccggcgcgcgaccctttgccgatcag
atcgccttcgtcgccgaccgccccggtcatgacgcacgctacgccatcgaccccacgcgc
atccggaccgagctgggctggcgcccctcggtcagcgtagaagaagggctcgcgcgcacg
gttgactggtatctgacgcacgagccctggtggcgcgccctgcaccgccgccgcggcgtc
ggccagcgtctgggggtcgtggcatga
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