Sinirhodobacter sp. HNIBRBA609: O5O51_02135
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Entry
O5O51_02135 CDS
T08716
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Pathway
sinr03030
DNA replication
sinr03410
Base excision repair
sinr03420
Nucleotide excision repair
sinr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O5O51_02135 (polA)
03410 Base excision repair
O5O51_02135 (polA)
03420 Nucleotide excision repair
O5O51_02135 (polA)
03440 Homologous recombination
O5O51_02135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinr03032
]
O5O51_02135 (polA)
03400 DNA repair and recombination proteins [BR:
sinr03400
]
O5O51_02135 (polA)
Enzymes [BR:
sinr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O5O51_02135 (polA)
DNA replication proteins [BR:
sinr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O5O51_02135 (polA)
DNA repair and recombination proteins [BR:
sinr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O5O51_02135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O5O51_02135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WBL33531
LinkDB
All DBs
Position
432610..435468
Genome browser
AA seq
952 aa
AA seq
DB search
MAFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFANMIFRYIEEAKGPDAP
THAAVIFDYSSKTFRNEIFPEYKANRPPPPEDLRPQFPLTRDATRAFNLPCIETEGFEAD
DIIATLAREAREAGGRVTIISSDKDLMQLIGGGVEMLDAMKNLRIGPDEVEAKFGVRPDR
VIDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLESLLARAEEIKQPKRRQTLIDFAD
QIRVSKRLVTLDDHAPLDFTLESLEVKDPNPEDLMAFLNLMEFRTLTKRVADRFGVEAPT
LPPMEPAGADAAARWAAGAAPQPRLEPKAVPEAPFDTAAYVCIRDAATLQTWLDEARALG
WLAVDTETTSLDEMRADLVGVSICSVAGKAAYIPLGHTTGGDDLFGGTARAPGQMDLDAA
LALLKPVLEDEAILKIGQNMKYDLKIFARHGIRVAPFDDTMLMSYAMFSGLHNHGMDELS
ERYLDHRPIPIKELLGTGKAQITFDKVEIDKAVAYAAEDADITLRLWARFKPMLHRARAT
TIYETEERPLVPVLADMEMAGVRVDAQVLARMSNAFAQKMAALEAEIQDLAGQPFNVGSP
KQLGEILFDQIGVPGGTKGKTGAYSTGADVLEDITTMEDQPKAAALSSKVLDWRQISKLK
STYTDALQGHVNPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSDEGRRIREAFVAGP
GMRIVSLDYSQIELRILAHVADLPAMKEAFREGLDIHAMTASEMFNVPIEGMDPMIRRQA
KAINFGVIYGISGFGLARNLRIPRAEAQGFIDRYFERFPGIRKYMDDTVAFAKENGFVET
LFGRRIHTPEINAKGPGAGFAKRAAINAPIQGAAADVIRRAMVRMPDAIRGLPATMLLQV
HDELIFEVEEGATEALIAAARATMEGAADPAVHLSVPLVVDAGTGASWAEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaaaggctgccatctgcatctgatcgacggctcggctttcatcttccgc
gcctatcatgcgctgccgccgctgacgcgcaagtcggacgggctgccggtgggggccgtc
gcgggctttgccaacatgatctttcgctatatcgaagaggccaagggccccgatgcgccg
acccatgcggcggtgatcttcgactatagctccaagactttccgcaacgagatcttcccc
gaatacaaggccaaccgcccgccgccgcccgaggatctgcgcccgcagttccccctgacc
cgcgacgcgacgcgtgcctttaacctgccctgtatcgagaccgagggtttcgaggccgac
gacattatcgccacccttgcgcgcgaggcccgcgaggccggcgggcgcgtcaccatcatc
tcgtcggacaaggatctgatgcagctgatcggcggtggggtcgagatgctcgatgcgatg
aagaacctgcgcatcggccccgatgaggtcgaggccaagttcggcgtgcgcccggatcgg
gtgatcgacgtgcaggcgctggcgggcgactcggtcgataacgtgcccggcgcgccgggg
atcgggatcaagacggcggcgcttctgatcaacgaatacggcgatctggaatcccttctg
gcccgcgccgaagagatcaagcagccgaagcggcgccagacactgatcgacttcgccgac
cagatccgggtctcgaagcgccttgtgacgctggacgatcacgcgccgctcgatttcacg
ctggagagccttgaggtcaaggatccgaaccccgaagatctgatggcattcctcaacctc
atggagttccgcacgctgaccaagcgcgtcgcggatcgcttcggggtcgaggcgccgacc
ctgccgccgatggaacccgccggggccgatgccgccgcgcgttgggccgccggtgccgcc
ccgcagccgcggcttgaacccaaggccgtgcctgaggcgcccttcgacaccgcggcctat
gtctgcatccgcgatgccgcgacgcttcagacctggctcgatgaagcccgcgcgcttggc
tggcttgccgtcgataccgagaccacaagccttgacgagatgcgtgccgatctggtcggc
gtgtcgatctgttcggtcgcaggcaaggccgcgtatatcccgcttggccatacgaccggg
ggcgacgatcttttcggcggcaccgcccgcgcgccggggcagatggatctggatgcggcg
ctggcgctgctcaaacctgtgcttgaggacgaagcgatcctcaagatcgggcagaacatg
aagtatgacctcaagatattcgcccgccacggcatccgcgttgcgccgttcgacgacaca
atgctgatgagttacgcgatgttctcggggctgcataaccacggcatggatgagctgtcg
gagcgttatctcgatcatcgcccgatcccgatcaaggaattgctggggacgggcaaggcg
cagatcaccttcgacaaggtcgagatcgacaaggccgtggcctatgcggccgaggatgcc
gacatcacgctgcgcctgtgggcccgcttcaagccgatgctgcaccgcgcccgcgccacc
acgatctacgaaaccgaagagcgcccgctggtgcccgttctggccgatatggagatggcg
ggcgtgcgcgtcgatgcgcaggttctggcgcggatgtcgaacgcttttgcccagaaaatg
gcggcgctggaggctgaaattcaggaccttgcgggccagcccttcaacgtgggctcgccc
aagcagttgggcgagatcctcttcgaccagatcggtgttccgggcgggaccaagggcaag
accggcgcctattccaccggcgccgatgtgcttgaggacatcaccacgatggaggatcag
cccaaggcggccgcgctgtcctcgaaggtgctcgactggcggcagatctcgaagctgaaa
tcgacctatacggatgcgcttcagggccatgtgaacccggaaaccgggcgggtgcatacg
tcctacagcatcgcaggcgcgaacaccgggcgtctggcctcgaccgatccgaacctgcaa
aacatccccgtgcgcagcgatgagggccgccgcatccgcgaggctttcgtggccgggccg
gggatgaggatcgtcagcctcgactacagccagatcgagctgcgcatcctcgcccatgtc
gccgacctgcccgcgatgaaagaggccttccgcgagggcctggatattcacgcgatgacg
gcgtcagagatgttcaacgtgccgatcgagggcatggacccgatgatccgccgtcaggcc
aaggcgatcaactttggcgtgatctacggcatctcgggctttggtctggcgcgcaacctg
cgcattccgcgcgccgaggcgcagggcttcatcgatcgttatttcgagcgtttccccggc
atacgcaaatacatggacgacaccgtggctttcgccaaggaaaacggctttgtcgaaacg
ctgttcggtcgccgcatccacacgcccgagatcaacgccaaggggccaggcgcgggtttc
gccaagcgcgccgcgatcaacgcgccgattcagggcgccgccgccgatgtgatccgccgc
gccatggtgcgtatgcctgacgcgatccgcggactgcccgcgaccatgctcttgcaggtg
cacgacgaattgatcttcgaggtcgaggaaggcgcgaccgaggcgctgatcgcggccgcg
cgcgcaacgatggagggggcggccgatccggcggtgcatctgtcggtgccgcttgtcgtc
gatgccggcaccggcgccagctgggccgaggcgcactga
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