Sinirhodobacter sp. HNIBRBA609: O5O51_05885
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Entry
O5O51_05885 CDS
T08716
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
WBL34232
LinkDB
All DBs
Position
1200872..1204939
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AA seq
1355 aa
AA seq
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MITDLLGRRWAARIFRGGRLTKVKGVVASYAPCLGFAVVATLAMAPDVRAQDLNWSGAGD
TAWDSTTNWAEATAPVGASDVVLDSASANQPVITGTTDSGSLTVNTVTVEQGQLTLQADG
TSPTLTVTNGTTINGGEVAVRDASVLDSAVTVGAGGALTVEGSVTGLVSTSGTVTNSGTL
AGGVTITGGTVSSSGTVSGTVAISNSATFRGTADTSIGALQVNGDATLSAAAGTTLTQTG
SFYASGADTLTFGSITDTGTVKLRMDGGSLTSGLKFVVAGGTLQGTSTNFPLVLSLINGT
TINSGATLDITGYNTPVKALSGSGTVTNSGAADQTLTLIGTSTFSGVIEDGATNAISVAR
NGTGTTTLGGVNTYTGATTVNGGTLAINATGSIQNTSGITVASGATLSVDGAGGDAINDS
ATIDNSGTFALTGSDETVGSIFGSGNIALNSNTLTTGDATDAEVSGVVSGSGDLVKQGSG
ALTLSGASTATGALVANAGTTVVSGSWAGDVENNATFDLTGTSTVGGTFTNTGTATFDVS
GTASVASLTNTTTSGTGTSIANFGTLYVNGAVENGVADGTAASVITNDWNLISGGAVTNH
AGATLNSNALTSALFATALTNNGTMNLQGRVDVGSITNSGAGAVLNIVGNTYGGSSPTGS
TPSTTPTGSLLNEGGATLNISGGELEVAGFTNSSAGSGTTLATAGVQVEASGILDASTIE
NTGSGTINNAGTMRATSVTNAADATLVSTGTISGNTQNSGTLNAAGTLAGSLSNTGAGTV
TTSGDLAGITTLDQTSTGLITVSDGDTLEAQTITVAAGSGGIAVGAGSTLSGTGNTLNNN
ALIAVAAGGTLSDVGAINNLSGGVFDFAGGGYLSADTDATGDEDITNAGSITLGAGTLEV
ALGGAGAFINNNLLQLASGSAVTVDGRYANNGTTDMQNGTAGETVTVNGEYSGGGVLAID
VDFTADTSDRLLVNGDVTGAQTSVAVADVSTGGASGNPVVIASVSGTAAADAFTLSTPLS
FGALVYEISQSGADFVLAGTGGFVAEVTGLEALPYAMLQQSRLPSLRERSGTDQLGVPTE
LQSVWFLVDGGTSEFAPAFSGSSFQAEMDQARIRGGLNFDAHTSDTGHLVLGVNLGYGSA
RSTISSDVATARIDTDARSLGLTATWFGNSGFYVDGQLQYTDFSSDMTSAGFASAISGEG
VSSELEIGQRFRMANSPWSLTPRGRLKYSTVSYDPFTSGGGLATSLDTAESLQLGMGLVA
ERQTASRAGGQDQGPTFYGSADIFRELAGDITTIVAGTPVVSAAEDWSGEIGLGLQHRFD
NGRGTINGELTYVTGFDNPGRNNALSVAISGRIAF
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgatttgctcgggcgccgttgggctgcgcgtattttccgtggcgggcgtctg
accaaggtcaagggggttgtggccagctatgcaccctgtctcggctttgctgttgtcgcg
acgctggcgatggcgccggatgtgcgggcgcaggatctgaactggagcggcgccggagat
acggcctgggacagcaccacgaactgggccgaggccacggcgccggtcggcgccagtgac
gtcgtgctggacagcgcctcggcgaaccagcccgtcatcaccggaacgaccgacagcggc
agcctgaccgtgaatacagttaccgtggagcaggggcagctgaccttgcaggcggatggc
acctcgccgacgctgaccgtgacgaatggcaccaccattaacggcggcgaggtcgcggtg
agggacgcctcggttctcgacagcgcggtcactgtcggggcgggcggcgcgctgacggtt
gagggcagcgtgacggggctggtcagcacctcgggcaccgtcaccaacagcggaactctg
gcagggggcgtcaccatcaccggcggcaccgtcagcagcagcggcacggtcagcggaacg
gttgccatatcgaacagcgcaacgttccggggaaccgccgataccagtatcggggcgctc
caggtgaatggcgacgcgaccctgtcagccgcagcgggtacaacgctgacgcaaaccggc
tccttctatgcgtccggcgccgacacgctgactttcggttcaataaccgacaccgggacg
gtcaaactcagaatggatggtggtagtctcacgtcggggctgaaattcgtcgtagccggg
ggcacattgcagggcacgagcactaatttcccccttgtcctgtccttaatcaacggtacg
accatcaacagcggggccacgctggacatcacgggctacaacacccccgtcaaagcgctg
tccgggagcggaacggtcaccaacagcggcgccgcagatcaaacgctgacgcttatcgga
acatcaacattctccggcgtgatcgaagatggcgcgacaaacgcgatttcggtcgcgcgc
aacggcaccgggaccacgacgctgggtggcgtcaacacctataccggtgcgaccaccgtc
aacggcggcacgcttgcgatcaatgcgacgggcagcatccagaacacctcggggatcacg
gtcgccagcggcgcgacgctcagtgtagacggtgcgggcggcgatgcgatcaacgacagt
gcaaccatcgacaacagcgggacattcgccctgaccggcagcgatgagaccgtgggctcg
atctttggcagcgggaatatcgcgctcaactcgaacacgctgacgaccggggatgcgacc
gatgccgaggtttcgggcgtggtctcaggctcgggcgatctggttaaacagggcagcggc
gccctgaccctgagcggggccagcaccgccaccggcgccctcgttgccaatgcgggcacc
accgtcgtgtcgggcagctgggccggggatgtcgaaaacaacgccaccttcgatctgacc
ggcacctcgacagtgggcggtacctttaccaacaccggcaccgcgaccttcgatgtcagc
ggaaccgcctcggtggccagcctgaccaacaccactacctcgggcaccggtaccagcatc
gccaacttcggcacgctctatgtcaacggcgccgtcgaaaacggcgtggccgatggcacc
gcagcgtcggtcatcaccaacgactggaacctgatcagcggtggagccgttacgaaccat
gccggggcgacgctgaattccaacgccttaaccagcgccctgtttgccaccgcgctgacc
aataacggcacgatgaacctgcagggccgcgtcgatgtgggcagcatcaccaacagcggt
gcgggggccgtgctcaatatcgttggtaacacctatggtggcagctcccccacgggcagc
accccctccaccaccccgaccggcagtttgctgaacgaaggcggtgccacgctgaacatc
tcgggtggcgaactcgaagtggcaggcttcaccaacagttcggcgggcagcggcacgaca
ctggccactgcgggcgtgcaggtcgaggccagcggcattctggatgccagcaccatcgaa
aacaccgggagcggtacgatcaacaacgcaggcacgatgcgcgccacgagcgtaaccaat
gctgcggacgcgacccttgtcagcaccggcacgatcagcggcaatacccaaaacagcggg
acgttgaacgccgcgggcacgctggccggatcgctgagtaacacaggcgcgggcaccgtc
accaccagcggcgatctggccgggatcaccacgctggatcagaccagcaccggcctgatt
acggtgtccgatggcgacacacttgaggcgcagacgatcaccgttgcggccgggtcgggg
ggcatcgcggttggcgcgggctcaaccctgtcggggaccggcaacacgctcaacaacaac
gcgctgatcgcggtcgctgcggggggcacgctgagcgatgtcggtgcgatcaacaacctg
tccggcggggtgttcgatttcgcgggcggaggttatctgtctgccgataccgatgccacg
ggcgacgaggatattaccaacgcgggcagcatcaccctgggcgcgggcactctggaggtt
gccctgggtggcgccggggccttcatcaacaacaaccttctgcagcttgcctcgggcagc
gcggtgacggtggacgggcgttatgccaacaacggtacgaccgacatgcagaacggcact
gcgggcgaaaccgtaacggtgaacggcgaatactccggtggcggtgtgttggccattgat
gtcgacttcaccgcggacacctctgaccggctgctggtgaacggggatgtgacgggcgcc
cagacgagtgtcgcggtggccgatgtctcgaccggcggggccagcggcaacccggtggtg
atcgcctcggtcagcggcaccgccgcagccgacgccttcaccctgtccacgccgctgtcc
ttcggcgcattggtctatgaaatcagccagagcggtgcggatttcgttctggccggaacc
ggcggcttcgtggccgaagtgaccgggcttgaagccttgccctatgcgatgctgcagcaa
agcaggctaccgagcctgcgcgaacgctctggcacggatcagcttggggtgcctaccgag
ctgcagtctgtgtggttcctggtcgatggcggcacatcggagtttgcaccggcgttttcc
ggttccagcttccaggccgagatggatcaggcccggattcgcggcggcctgaacttcgac
gcccatacctccgataccgggcatctggttctgggggtcaatcttggctacgggtccgcc
cgttcgacgatctcctcagacgtcgcgacagcgaggatcgacaccgacgcgcgctcgctc
gggctgacggcgacatggttcggcaattccggcttctatgtcgacgggcagctgcaatac
accgatttcagcagcgacatgacatcggcgggcttcgccagcgcgatctcgggcgaaggt
gtctccagcgagcttgaaatcggccagcggttccgcatggcaaattcgccctggtctctg
acgccgcgcgggcggctgaaatacagcactgtcagctatgatccgttcaccagcgggggc
gggctggcgacatcgctggacacggccgaaagcctgcaattgggcatgggtctggtcgcc
gagcggcagaccgcatcgcgcgcgggtgggcaggatcaaggcccgacgttctatggatcg
gccgacatcttccgcgaactcgcgggcgacatcaccacgatagttgcgggaacgccggtg
gtaagcgcggccgaggattggagcggcgagatcggtctgggcctgcaacaccgcttcgac
aacgggcgcggcacgatcaatggcgaactgacctatgtgacgggctttgacaatcccggc
cgcaacaacgcgctctccgtggcgatcagcggtcgcatcgccttctga
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