Sinirhodobacter sp. HNIBRBA609: O5O51_06825
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Entry
O5O51_06825 CDS
T08716
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinr03016
]
O5O51_06825 (thpR)
Enzymes [BR:
sinr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
O5O51_06825 (thpR)
Transfer RNA biogenesis [BR:
sinr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
O5O51_06825 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WBL34410
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All DBs
Position
1396612..1397184
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AA seq
190 aa
AA seq
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MRAFVAIPMPGEAVAPIVALQTLLGCGRAVAEENLHLTLAFLGEISLAEAQALDEELAAI
PTQPLVLELAGADVMDRARPDLVFVGLRKNPPLEALQRHVAAAARAVGIDLARRRFRPHV
TLARFGRAYGPAEELRLGRFLEASADFSLPGFAVGEFVLYSSTLDPHGPRYDRLAEYPIG
DLPGSDWAEE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctttcgtagcgattccgatgccgggagaggcggtggcaccgattgtcgcgctg
caaaccctgttgggctgcggccgggcggtggccgaggagaacctgcacctgacgctggcg
tttctgggcgagatcagtctggccgaggcgcaggcgctggatgaggaactggctgctatt
ccgacgcagcctctggtgctggaactggcgggggcggatgtgatggaccgcgcgcgcccc
gatctggtctttgtcggcctgcgcaagaacccgccgcttgaggccctacagcgccatgtg
gcggcggcggcgcgtgctgtcgggatcgatctggcacggcggcggtttcgtccgcatgtg
acccttgcgcgctttggtcgcgcctatggtccggccgaggaattgcggcttggacgcttc
ctggaggcctcggccgatttcagcctgcccggattcgcagtgggggagttcgtgctttat
agctcgacgctcgatccccatgggccgcgttatgaccgtctggcagaataccccattggc
gatctgcccgggtcggattgggccgaggaataa
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