KEGG   Sinirhodobacter sp. HNIBRBA609: O5O51_07455
Entry
O5O51_07455       CDS       T08716                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
sinr  Sinirhodobacter sp. HNIBRBA609
Pathway
sinr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sinr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    O5O51_07455
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sinr02022]
    O5O51_07455
Two-component system [BR:sinr02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   O5O51_07455
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 MCM AAA_5 AAA AAA_16 AAA_19 cREC_REC AAA_2 FleQ nSTAND3 AAA_22 OKR_DC_1_N AAA_18 NB-ARC KTI12 VpsR
Other DBs
NCBI-ProteinID: WBL34529
LinkDB
Position
1520273..1521679
AA seq 468 aa
MTDILIVDDEKDIRELIADILKDEGFATRMAANSDDCMEAINSEAPALMILDIWLKDSRM
DGIDILKTVKRDNPDIPIIIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVISRAME
TSRLRRENSSLRRRDLHSGEMLGNSVAFRKLKDQLDKVTKSNGRIMLTGEPGSGKETAAR
YIHQHSNRAAAPFVTVNSASIAPERMEEVLFGRETSERGIEKGLLEQAHGGVIYFDEVAE
MPLGTQSKILRVLTDQQFLRVGGSDKVRVDLRVVSSTTRDLGAEIAAGRFRQELYDRLNV
VPIPVPSLAERREDVPLLSEHFIEAFNRTQGLPLRELSEDAMAMMQTMEWPGNIRQLRNV
IERVLILGEGTGPIEARELPGDSAPAEEGRIVLGGQLATLPLREARELFEREYLLTQINR
FGGNISRTANFVGMERSALHRKLKSLGVVTQTKAGARVATLDGTEDDF
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgactgacattctgattgttgatgacgaaaaagacattcgcgaattgatcgcggacatc
ctgaaagacgaaggcttcgccactcgcatggcggcgaattccgacgactgcatggaggcg
atcaattccgaggcccccgcgctgatgatcctcgatatctggcttaaggacagccggatg
gacgggatcgacattctcaagacggtcaagcgcgacaatcccgatatcccgatcatcatc
atctcggggcacggcaatatcgagatcgccgtcgccgcgatcaagcagggcgcctatgat
ttcatcgagaagcccttcaatatcgaccagttgatggtggtgatctcgcgggcgatggaa
acttcgcggctgcggcgcgagaactccagcctgcgccggcgcgatctgcactcgggcgag
atgctcgggaactcggtggcgtttcgtaagctcaaggaccagctcgacaaggtcaccaag
tcgaacggtcggatcatgctgacaggcgagccgggatcgggcaaggaaaccgcggcgcgc
tatattcaccagcattcgaaccgcgcggctgcgcccttcgtgacggtcaattccgcctcg
atcgcgcccgaacggatggaagaggtgttgtttggccgcgaaacttcagagcgcgggatc
gaaaaggggctgctcgaacaggcccatggcggcgtgatctatttcgacgaagtggccgag
atgcccttgggtacgcagtccaagatcctgcgtgtgctgaccgatcagcaattcctgcgc
gtcggcggctcggacaaggtgcgcgtcgatctgcgcgtcgtgagctctaccacccgcgac
cttggcgccgagattgccgccgggcgcttccggcaggagctttatgaccggctgaatgtc
gtgccgatcccggtgccctcgttggccgagcggcgcgaggatgtgccgcttctgtccgag
catttcatcgaggcgttcaaccgcacccagggtctgccgctgcgcgagttgtcggaagat
gcgatggcgatgatgcaaacgatggaatggccgggcaacatccgccagctgcgcaacgtg
atcgagcgcgttctgatcctgggcgaggggaccggcccgattgaggcgcgcgaactgccg
ggcgatagcgccccggccgaagaggggcgtatcgttcttggcggccagttggcgacactg
ccgctgcgcgaggcgcgcgagctgttcgaacgcgaatacctgctgacccagatcaaccgc
tttggcggcaatatctcgcgcaccgcgaatttcgtcggcatggagcgatcggccctgcac
cgcaagctcaagtcgctcggggtggtcacgcagaccaaggcgggcgcgcgcgtcgccacg
ctcgacgggaccgaggacgacttctga

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