Sinirhodobacter sp. HNIBRBA609: O5O51_12125
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Entry
O5O51_12125 CDS
T08716
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Pathway
sinr00220
Arginine biosynthesis
sinr00240
Pyrimidine metabolism
sinr00250
Alanine, aspartate and glutamate metabolism
sinr01100
Metabolic pathways
sinr01110
Biosynthesis of secondary metabolites
sinr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
O5O51_12125 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
O5O51_12125 (carB)
00220 Arginine biosynthesis
O5O51_12125 (carB)
Enzymes [BR:
sinr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
O5O51_12125 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
CoA_binding_2
HAMP_N3
Motif
Other DBs
NCBI-ProteinID:
WBL32468
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All DBs
Position
2449624..2452956
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AA seq
1110 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTSLALADMGVLEKFGVEMIGAKR
EAIEMAEDRKLFREAMDRLGIENPKATIVAAPKLPNGKYDINAGVAQAMADLEHIGLPAI
IRPAFTLGGTGGGVAYNRDDYERICRSGLDASPMAQILVDESLLGWKEYEMEVVRDKADN
AIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQIMRNGSIAVLREIGVETGGSNVQWA
INPKDGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITKVTPASF
EPTIDYVVTKIPRFAFEKFPGSKAELTTAMKSVGEAMAIGRTFHESVQKALASMETGLSG
FDEIEIPGAPDKAAIVKAISSQTPDRLRLIAQAMRHGLSDDEIVAATAFDPWFLARIREI
IDAEAEVRKHGLPLTEDGLRKLKMMGFTDARLAKLTGRDEAQVRRARRNLGVKAVFKRID
TCAAEFEAQTPYMYSTYEAPAMGDVECEARPSDRKKVVILGGGPNRIGQGIEFDYCCCHA
CFALTKAGYETIMVNCNPETVSTDYDTSDRLYFEPLTLESVLEILRVEQENGTLHGVIVQ
FGGQTPLKLANALEAEGIPILGTTPDAIDLAEDRERFQKLLNDLDLKQPVNGIAHSDAEA
FEIAGRVGYPLVIRPSYVLGGRAMEIVRDLDQLKRYITNAVVVSGDSPVLLDSYLSGAIE
VDVDALSDGQTVHVAGIMQHIEEAGVHSGDSACSLPPYSLSAETIAELKAQTEKMALALG
VVGLMNVQFAIKDGEIYVLEVNPRASRTVPFVAKATDSAIASIAARLMAGEPMANFPQRA
PYPAGVGPETPLPFADPLTLADPNTPWFSVKEAVLPFARFPGVDTLLGPEMRSTGEVMGW
DRNFPRAFLKAQLGAGTNLPEEGRVFLSVKDSDKSDELAEAARELIAMGFALVATRGTAV
WLKEAGIEAEAVNKVYEGRPNIVDRLKNGDIQLVLNTTEGNQSISDSRDIRAVALYDKIP
YFTTAAASIAAVAAMKSRAEGEIDVRPLQA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagaaccgacatcaagtccatcctcatcatcggcgcagggcctattgtaatc
ggccaggcctgcgagttcgactactcgggcgcccaggcctgtaaagccctgcgcgaagag
ggctaccgcgtcatcctggtcaactcgaacccggccacgatcatgaccgaccccgagatg
gccgacgccacctatatcgagccgatcacccccgaggtcgtcgccaagatcatcgagaaa
gagcgcccggacgcgctgctgcccaccatgggcggccagaccggcctgaacacctcgctc
gcccttgccgacatgggtgtgctggagaaattcggcgtcgagatgatcggcgccaagcgc
gaggccatcgaaatggccgaagaccgcaagctgttccgcgaggcgatggatcgccttggc
atcgagaaccccaaggccaccatcgtcgccgcgccgaaactgcccaacggcaagtatgac
atcaacgccggcgtcgcgcaggcgatggcggatcttgagcatatcggcctgcccgcgatc
atccgccccgccttcacccttggcggcaccggcggcggcgtcgcctataaccgtgacgac
tacgagcgcatctgccgctcgggtctcgacgcctcgccgatggcgcagatccttgtcgat
gaatcgctcctcggctggaaagaatacgagatggaggttgtgcgcgacaaagccgacaac
gccatcatcgtctgctcgatcgagaacatcgatccgatgggcgtgcacaccggcgactcg
atcaccatcgcgcccgcgctgacgctgaccgacaaggaataccagatcatgcgcaacggc
tcgatcgccgtgctgcgcgagatcggcgtggaaaccggcggctcgaacgtgcaatgggca
atcaacccgaaagacggccgcatggtcgtgatcgagatgaacccgcgcgtgtcgcgctcc
tcggcgctggcctcgaaagccaccggcttcccgatcgccaagatcgccgcgaaactggcc
gtgggctacacgctcgatgagctggacaacgacatcaccaaggtcacgccggccagcttc
gagccgaccatcgactatgtcgtcaccaagatcccgcgctttgcgtttgagaagttcccc
ggctccaaggctgagctgaccaccgcaatgaaatcggtgggcgaggccatggccatcggc
cgcaccttccacgaatcggtgcagaaggcgctggcctcgatggagaccggcctgtcgggc
ttcgacgagatcgagatccccggcgcgcccgacaaggccgccatcgtcaaggcgatctcc
tcgcaaaccccggaccgcctgcgcctgatcgcgcaagccatgcgccacggcctgagcgat
gacgagatcgtcgccgcgaccgccttcgacccgtggttcctggcccgcatccgcgaaatc
atcgacgccgaggccgaagtgcgcaagcacggcctgccgctgaccgaagacggactgcgc
aagctcaagatgatgggctttaccgacgcccgtctggccaagctgaccggccgtgacgag
gcgcaggtgcgccgcgcccgccgtaacctcggcgtcaaggcggtgttcaagcgcatcgac
acctgcgccgccgagttcgaagcccagaccccctacatgtattccacctacgaagccccc
gcgatgggcgacgtggaatgcgaggcgcgcccctcggaccgcaagaaggtcgtcatcctc
ggcggcggtccgaaccgcatcggccaggggatcgagttcgactactgctgctgccacgcc
tgtttcgcgctgaccaaggcgggctatgagaccatcatggtcaactgcaaccccgagacc
gtgtccaccgactacgacacctcggaccgcctctatttcgaaccgctgacgctggaatcg
gtgctcgaaatcctgcgcgtcgagcaggaaaacggcacgctgcacggcgtgatcgtgcag
ttcggcggccaaaccccgctgaaactggcgaacgcgctcgaagccgaaggcatcccgatc
ctgggcaccacccccgacgccatcgacctggccgaggaccgcgagcgcttccagaagctg
ctcaacgatctcgacctcaagcagccggtcaacggcatcgcgcatagcgacgccgaggcc
ttcgagatcgcgggccgcgtgggatacccgctggtgatccgcccctcctacgttctgggt
ggccgcgcgatggagatcgtgcgcgacctcgaccagctcaagcgctacatcaccaacgcc
gtggtcgtctcgggcgacagcccggtgctgctcgacagctacctgtcgggcgcaatcgag
gtggacgtcgacgcgctctcggatgggcagaccgtgcatgtcgcgggcatcatgcagcac
atcgaagaggcgggcgtccactcgggcgactcggcctgttcgctgccgccctactcgctc
tcggccgagaccatcgccgaactcaaggcgcagaccgaaaagatggcgctggcgcttggc
gtagttggcctgatgaacgtgcagttcgcgatcaaggacggcgagatctacgtgctcgaa
gtcaacccgcgcgcctcgcgcaccgtgcccttcgtcgccaaggccaccgactcggccatc
gcctcgatcgccgcgcgtctgatggcgggtgagccgatggcaaacttcccgcagcgcgcg
ccctacccggcgggcgttggccccgagacccccctgcccttcgccgacccgctgacgctg
gccgatccgaacacgccgtggttctcggtcaaagaggccgtcctgcccttcgcccgtttc
ccgggcgtcgatacgctactcgggccggaaatgcgttcgaccggtgaggtcatgggctgg
gaccgcaacttcccgcgcgccttcctcaaggcgcagcttggcgcaggcaccaacctgccc
gaagagggccgcgtgttcctctcggtcaaagatagcgacaagtcggacgaactggccgag
gccgcgcgcgagctgatcgcgatgggctttgcccttgtcgccacccgcggcaccgccgtc
tggctaaaagaggcagggatcgaagccgaggccgtcaacaaggtctatgaaggccgcccg
aacatcgttgaccgcctgaagaacggcgacatccagctggtgctgaacacgaccgagggc
aaccagtcgatctcggacagccgcgacatccgcgccgtggcgctttacgacaagatcccc
tatttcaccaccgccgccgcctccatcgccgccgtcgccgcgatgaagtcccgcgccgaa
ggggaaatcgacgtgcgcccgctgcaggcttaa
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