Sinirhodobacter sp. HNIBRBA609: O5O51_12370
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Entry
O5O51_12370 CDS
T08716
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Pathway
sinr00260
Glycine, serine and threonine metabolism
sinr00460
Cyanoamino acid metabolism
sinr00630
Glyoxylate and dicarboxylate metabolism
sinr00670
One carbon pool by folate
sinr00680
Methane metabolism
sinr01100
Metabolic pathways
sinr01110
Biosynthesis of secondary metabolites
sinr01120
Microbial metabolism in diverse environments
sinr01200
Carbon metabolism
sinr01230
Biosynthesis of amino acids
sinr01240
Biosynthesis of cofactors
Module
sinr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
O5O51_12370
09102 Energy metabolism
00680 Methane metabolism
O5O51_12370
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
O5O51_12370
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
O5O51_12370
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
O5O51_12370
Enzymes [BR:
sinr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
O5O51_12370
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WBL32515
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Position
2506289..2507581
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AA seq
430 aa
AA seq
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MTDQRDAGFFTESLATRDPDLFNSITDELGRQRDEIELIASENIVSKAVMEAQGSVMTNK
YAEGYPGKRYYGGCQFVDVAENLAIDRAKALFGCEFANVQPNSGSQANQGVFNALLKPGD
TILGMNLASGGHLTHGAAPNQSGKWFNAVQYGVRQQDNRIDYDEVAALAKEHQPKLIIAG
GSAIPRQIDFAKFREIADSVGAFLMVDMAHFAGLVAGGAHPSPFPYADVATTTTHKTLRG
PRGGMILTNSEEIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKVYAKQVIANA
QALADELMKGGLDIVTGGTDTHVMLVDLRPKGVKGNATDKALGRAHITCNKNGIPFDPEK
PTVTSGIRLGTPAGTTRGFGEAEFRQIGRMIIKVVDGLAANGEENNDAVEAEVRKEVAEL
CAKFPLYPGM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcaacgcgatgccggcttcttcaccgaaagcctcgccacccgtgacccggac
ctgttcaactcgatcaccgacgagcttggccgccagcgcgacgagatcgagctgatcgct
tctgaaaacatcgtctcaaaggcggtgatggaggcccaaggctcggtgatgaccaacaaa
tacgccgagggctatccgggcaagcgttactacggcggctgccagttcgtggacgtggcg
gaaaacctggctatcgaccgcgcgaaggcgctgtttggctgtgaattcgccaacgtgcag
ccgaactcgggctcgcaagcaaaccagggcgtgttcaacgcgcttctgaagcccggcgac
accatccttggcatgaacctcgcctcgggcggtcacctgacccacggcgcggccccgaac
cagtcgggcaagtggttcaacgccgtgcaatacggcgtgcgccagcaggacaaccgcatc
gactacgatgaggtcgctgccctcgccaaggaacaccagcccaagctgatcatcgcgggc
ggctcggccattccgcgccagatcgacttcgccaagttccgtgaaatcgcggattcggtc
ggcgccttcctgatggtggacatggcgcacttcgcgggcctcgtggctggcggcgcgcat
ccctcgcccttcccctatgcggacgtggccaccaccaccacccacaagaccctgcgcggc
ccgcgcggcggcatgatcctgaccaacagcgaagagatcgcgaagaaggtcaactcggcc
atcttcccgggcatccagggcggtccgctgatgcacgttatcgccgccaaggcggtcgcc
ttcggcgaggccctgcgccccgagttcaaggtctacgccaagcaggtcatcgccaacgcg
caggcgctggcggatgagctgatgaagggtggcctcgacatcgtcaccggcggcaccgac
acccacgtgatgctggtggacctgcgcccgaaaggcgtgaagggcaacgcgaccgacaag
gcgcttggccgcgcgcatatcacctgcaacaagaacggcatcccgttcgacccggaaaag
ccgaccgtgacctcgggcatccgtctgggcaccccggcgggcaccacccgcggcttcggc
gaggccgagttccgccagatcggccgcatgatcatcaaggtcgtcgatggtctcgccgcc
aatggcgaagagaacaacgacgcggtcgaggccgaggtccgcaaggaagtggccgaactc
tgcgccaagttcccgctctatccgggcatgtga
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