Sinirhodobacter sp. HNIBRBA609: O5O51_13640
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Entry
O5O51_13640 CDS
T08716
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sinr
Sinirhodobacter sp. HNIBRBA609
Pathway
sinr00300
Lysine biosynthesis
sinr00470
D-Amino acid metabolism
sinr01100
Metabolic pathways
sinr01110
Biosynthesis of secondary metabolites
sinr01120
Microbial metabolism in diverse environments
sinr01230
Biosynthesis of amino acids
Module
sinr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sinr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O5O51_13640 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O5O51_13640 (dapF)
Enzymes [BR:
sinr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O5O51_13640 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WBL32750
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All DBs
Position
complement(2766698..2767531)
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AA seq
277 aa
AA seq
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MNSTLTPPTGLRFMKMHGLGNDFVVIDARDGVDPVTPALARAVGDRNRGVGFDQLAVILP
SQAADFALEFWNSDGSKAGACGNATRCVSDWMMRQLGKDAVTLTTARGTLSARRREDGLV
SVNMGAPILEAAAIPVAAEPMHLPLAGDPIAVGMGNPHCIYFVADAEAVDVAGLGPQIEH
DPLFPERTNVEFASLIAPDHLRMRVWERGAGITLACGSGTCATAVAAHLRGLTGRHVIVD
VDGGRLEIDWRDDGVWMTGPTALVFEGVLSPAFLASA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacactgacccctccgaccggcctgcgtttcatgaagatgcatggtctgggc
aacgactttgtggtgatcgacgcgcgtgatggcgtcgatccggtgacgcctgcgctggcg
cgtgcggtgggtgatcggaatcggggcgtgggctttgatcagcttgcggtgatcctgcct
tcgcaagcggctgatttcgcgctggaattctggaactcggatggctcgaaagcgggcgct
tgcggcaatgccacgcgctgcgtatcggactggatgatgcgccagttgggcaaggacgct
gtcaccctgaccaccgcgcgcggcacgctttcggcgcgtcggcgcgaagacgggctcgtt
tcggtcaacatgggcgcgccgattctggaggcggcggcgattccggtcgcggcggaaccg
atgcatctgccgctggcgggtgatccgattgccgtcggtatgggcaacccgcattgcatc
tatttcgtcgcggatgccgaggcggtggatgtcgcgggtcttggcccgcagatcgagcat
gacccgctcttccccgagcgcaccaatgtcgaatttgcctcgctcatcgcgccggaccat
ttgcgcatgcgggtgtgggagcgcggggcgggcatcacgctcgcttgtggctcgggcacc
tgtgccaccgccgtagccgcgcatctgcgcgggctgaccgggcggcatgtgatcgtcgat
gtggacggtgggcggcttgagatcgactggcgcgacgatggcgtctggatgaccggcccg
accgcgctggtgttcgagggcgtcctgagccccgcattcctggccagcgcatga
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