Streptococcus iners: PW252_00660
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Entry
PW252_00660 CDS
T10964
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sins Streptococcus iners
Pathway
sins03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sins00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PW252_00660 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sins03021
]
PW252_00660 (rpoB)
03400 DNA repair and recombination proteins [BR:
sins03400
]
PW252_00660 (rpoB)
Enzymes [BR:
sins01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PW252_00660 (rpoB)
Transcription machinery [BR:
sins03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PW252_00660 (rpoB)
DNA repair and recombination proteins [BR:
sins03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PW252_00660 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
NusG_add
Motif
Other DBs
NCBI-ProteinID:
WNY51207
UniProt:
A0AA96VLJ0
LinkDB
All DBs
Position
98556..102128
Genome browser
AA seq
1190 aa
AA seq
DB search
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDYGLKEVFEDVLPVSNFTD
TMELEFVGYELKQPKYTLEEARAHDANYSAPIYVTFRLVNKETGEIKTQEVFFGEFPIMT
EMGTFIINGAERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVRNTIEKDIHKNPADSRTDEALKE
IYERLRPGEPKTAESSRSLLTARFFDPRRYDLAPVGRYKINKKLNLRTRLLNQTLAEHVI
NGETGEIVLEAGTVLSRDVLEKVEAQFDELNLVEYIPNDNAVLLEPVLLQKFKIVAPKDP
DRVVTVIGNANPAENVRIVTPADILAEMSYFLNLAEGLGRVDDIDHLGNRRIRAVGELLA
NQVRIGLTRMERNLRERMSVQDNEVLTPQQIINIRPVTAAIKEFFGSSQLSQFMDQHNPL
SELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGHL
NKYGFIQTPYRKIDRATGTVTNEIVWLTADEEDAYIVAQSTSPLDENNRFVDKIVMGRHQ
GNNQEFAADSADFMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPY
VGTGMEYQAAHDSGAAVIAQHDGKVVYADADKVEVRREDGSLDVYSIQKFRRSNSGTAYN
QRTLVKLGDVVEKGDFIADGPSMERGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKDD
VYTSVHLEEYESETRDTKLGPEEITREIPNVGEDALRNLDEMGIIRIGAEVKEGDILVGK
VTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGADGVVRDVKIFTRANGDELQSGV
NMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPSR
MNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWSTVKEAGMDSDAKTILYDGRTGEP
FDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEA
YGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVL
DEDNNEVELRDLDEGEDDDIIHVDDLEKARAKAAADAAAAFAAEEAEDKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcagtacggtaaacaccgtacccgtcgtagtttttcaagaatc
aaggaagttcttgatttaccaaatttgattgaaatccaaacggattcatttaaagatttt
cttgactatggtttgaaagaagtctttgaagatgtacttccagtttcaaactttacggat
accatggaattggaatttgtgggttatgagttgaagcaacccaaatatactttggaagag
gcgcgtgcacatgatgccaactactcagctccaatctatgtaactttccgtcttgtgaat
aaggaaactggcgagattaaaactcaggaagttttcttcggtgagttcccaatcatgact
gaaatgggtaccttcatcatcaacggtgcagagcgtatcatcgtttctcagttggttcgt
tcaccaggtgtttatttcaacgataaagttgataagaacggtaaggttggttatggttca
acggtaatccctaaccgtggtgcctggttggaattggaaacggactcaaaagatattgcc
tatactcgtatcgaccgtacgcgtaaaattccatttacaacgctggtgcgtgcgcttggt
ttctcaggtgatgatgaaatctttgatatcttcggtgatagcgaattggtccgcaacact
attgagaaagatattcataaaaatccagcggattctcgtacagatgaagcgcttaaggaa
atctatgagcgtcttcgtccaggtgaaccaaagacagccgaaagctctcgtagccttttg
acagctcgtttctttgaccctcgtcgttacgacttggcacctgttggtcgttacaagatt
aataaaaaactcaacctccgtactcgtttgctcaaccaaacacttgctgagcatgtcatt
aacggtgaaacaggcgaaatcgtcttggaagctggtactgtcttgagccgtgatgtgctt
gaaaaagtagaagcacaattcgatgagctcaacttggtagaatacattccaaatgataat
gctgttcttcttgaaccagttctcttgcagaagtttaagattgttgcaccaaaagatcca
gaccgtgttgtaacagttattggtaatgctaatccggctgaaaatgtgcgtattgttaca
ccagcagatatcttggctgagatgagctatttcctcaaccttgcggaaggccttggtcgt
gtagatgacattgaccacttgggtaaccgtcgtattcgtgccgttggtgagttgcttgcc
aaccaagtccgtatcggtttgactcgtatggaacgtaacttgcgtgagcgtatgtctgtt
caagacaatgaagtattgacgccacaacaaatcatcaatatccgtcctgttacagccgca
atcaaagaattctttggttcatctcagttgtcacagttcatggaccaacacaacccgctt
tctgagttgtctcacaaacgccgtttgtcagccttgggacctggtggtttgactcgtgac
cgtgctggttatgaggttcgagacgttcactacacccactatggtcgtatgtgtccgatt
gaaacacctgagggaccaaacatcggtttgatcaacaacttgtcttcttatggtcacctc
aacaagtatggtttcatccaaacaccataccgcaagattgaccgtgcaactggtacagtt
acgaacgaaatcgtttggttgacagcggatgaagaagatgcctacatcgtagcacaatca
acttcaccacttgatgaaaacaaccgtttcgttgataagattgtaatgggccgtcaccaa
ggtaacaaccaagaatttgctgctgactcagcagacttcatggacgtttcacctaagcag
gtagttgccgttgcgacagcatgtattcctttcttggaaaacgatgactccaaccgtgcc
ctcatgggtgccaacatgcaacgtcaggccgttccattgattgatcctaaagcgccttac
gttggtacaggtatggaataccaggctgcccatgactcaggtgccgcagttattgcccaa
cacgatggtaaagttgtttacgcggatgcagacaaagttgaggttcgtcgtgaagatggc
tctttggatgtttacagcattcagaaattccgtcgttcaaactcaggtacagcctacaac
caacgcacccttgttaaattgggcgatgttgtagaaaaaggtgatttcatcgcagatggt
ccttctatggaacgtggggaaatggctcttggtcaaaaccctatcgttgcctacatgacc
tgggaaggttacaacttcgaggacgcggttatcatgtctgaacgccttgtgaaagacgat
gtctatacatctgttcatttggaagaatacgaatcagaaacccgtgatactaagttaggc
cctgaagaaatcactcgcgaaattccaaacgttggtgaagatgctcttcgcaacttggat
gaaatggggatcatccgtattggtgctgaggttaaagaaggcgacattcttgttggtaaa
gtcactccaaaaggtgaaaaagatctttctgctgaagagcgcctcttgcacgctatcttc
ggtgataagtcacgtgaagttcgtgatacatctcttcgtgtacctcacggtgccgatggt
gtcgttcgtgatgtgaaaatctttacccgtgccaacggtgatgaattgcaatcaggtgtt
aacatgctggtccgtgtttacatcgctcaaaaacgtaagatcaaggtcggagataagatg
gccggtcgtcacggtaacaagggtgtcgtttcacgtattgtacctgttgaggatatgccg
tatcttccagacggaacaccagttgacatcatgttgaacccacttggggtgccatcgcgt
atgaacatcggtcaggttatggagcttcacttgggtatggcggctcgcaacttgggcatc
cacattgcaacaccagttttcgatggtgcaagttcagaagacctctggtcaactgttaaa
gaagcaggtatggactcagatgccaagaccattctttacgatggccgtaccggtgagccg
tttgacaaccgtgtatctgttggtgtcatgtacatgatcaagcttcaccacatggttgat
gataaacttcacgcccgctcagtcggaccatactcactcgttacccaacagccactcgga
ggtaaggctcagtttggtggtcagcgtttcggtgagatggaggtttgggcccttgaagcc
tacggtgcttcaaacgtccttcaagaaatcttgacttacaagtcagatgatgtgacaggc
cgtctgaaagcctatgaagccatcaccaaaggtaaaccaattccaaaaccaggtgttcca
gaatcattccgcgttcttgtcaaagaattgcaatcacttggtttggatatgcgtgtcctt
gatgaagataacaatgaagtagaattgcgtgaccttgatgaaggtgaagatgatgacatc
atccacgtagatgatcttgaaaaagcacgtgcaaaagcagcagctgacgcagcggcagcc
tttgcagcggaagaagcggaagacaaagagtaa
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