Streptococcus iners: PW252_00665
Help
Entry
PW252_00665 CDS
T10964
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sins Streptococcus iners
Pathway
sins03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sins00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PW252_00665 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sins03021
]
PW252_00665 (rpoC)
03400 DNA repair and recombination proteins [BR:
sins03400
]
PW252_00665 (rpoC)
Enzymes [BR:
sins01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PW252_00665 (rpoC)
Transcription machinery [BR:
sins03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PW252_00665 (rpoC)
DNA repair and recombination proteins [BR:
sins03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PW252_00665 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WNY51208
UniProt:
A0AA96VL69
LinkDB
All DBs
Position
102306..105953
Genome browser
AA seq
1215 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPERDGLFDEVIFGPTKDWEC
SCGKYKRIRYKGITCDRCGVEVTRAKVRRERMGHIELKAPISHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTDLVHKSIMTEREYRERLREHGYGSFVAKMGAEAIQDLL
KQVDLPKEIAALKEELKTATGQKRIKAVRRLDVLDAFYKSGNKPEWMILNILPVIPPDLR
PMVQLDGGRFAASDLNELYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAREIAGNVKAAKRLIERGDDRIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMVFKDADEAVMAYRNGYVHLHTRVGI
ATDSLDKPWKDNQKHKIMMTTVGKILFNAIMPEGLPYLQEPNNANLTEGTPDKYFLEPGS
DIKAAIAELPINLPFKKKNLGNIIAEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGI
ADIPVIDNKAEIIEESHERVEQIKKQFRRGMITDDERYTAVTDEWRSAKEKLEKRLVEKQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLE
ERLQGRYTKKTVKHPETGAVIIGPNQLITEDIAREIVNAGVEQVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDAATRTKKVFVKGKTGEGEYVVPFTARMKVEVGDQV
ARGAALTEGSIQPKHLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKV
RVMDPGDTDLLMGTLMDITDFTDANAEVVIAGGIPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTV
AEELAAEANLEAVTE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgatttaaaagtatgcaaatcacgttagcttcaccaagtaaggtt
cgttcatggtcttacggtgaggttaaaaaacctgaaacaatcaactatcgtacacttaaa
ccagaacgtgatggactttttgacgaagtcatctttggtccaacaaaagactgggagtgt
tcatgtggtaaatacaagcgtatccgttataaagggattacttgtgaccgctgtggtgtt
gaagtaactcgtgccaaagtccgtcgtgagcgtatgggacacattgagttgaaagcgcca
atttcacacatttggtatttcaaaggtattccaagccgtatgggcttgaccttggacatg
agtccgcgtgcgcttgaagaagttatttacttcgcagcctacgtggtcattgatccaaaa
gatacagaccttgtgcacaagtcaatcatgactgagcgcgaataccgtgagcgtttgcgt
gaacatggttatggttctttcgttgctaagatgggtgcagaagccattcaagacctcttg
aagcaagtcgatcttccaaaagaaatcgcagctttgaaagaagaattgaaaactgctaca
ggacaaaaacggatcaaggctgtacgtcgtttggatgtactcgatgccttctataaatct
ggaaataaacctgagtggatgattcttaacatccttccagttattccaccagatttgcgc
ccgatggttcagttggatggtggtcgttttgcggcgtctgacttgaacgaactctatcgc
cgtgttattaaccgtaacaaccgtttggctcgtcttttggaacttaacgctccaggcatt
atcgtacagaacgaaaaacggatgctccaagaagctgtggatgctttgattgacaacggt
cgccgtggtcgtccaattacaggaccaggtagccgtccgctcaaatcactcagccacatg
cttaaaggtaagcaaggtcgtttccgtcaaaacttgcttggtaagcgtgttgacttctca
ggacgttccgttatcgccgttggtccaacgcttaaaatgtaccaatgtggtgtgccacgt
gaaatggctatcgagctcttcaaaccgtttgtcatgcgtgaaatcgttgcccgtgagatt
gcaggtaacgtgaaagcagctaaacgcttgattgaacgtggtgatgatcgtatttgggat
atcttggaagaagtgattaaagaacacccagttctcttgaaccgggcacctacccttcac
cgtttgggtatccaggcctttgagccagttctgatcgacggtaaagcccttcgtttgcac
ccgcttgtctgtgaagcttacaacgccgacttcgacggtgaccagatggccattcacgtt
ccattgtcagaagaagcacaagcagaagctcgtatcctcatgcttgcggcagaacacatc
cttaaccctaaagatggtaaaccagttgtaacaccatctcaggatatggttttgggtaac
tactacttgaccatggaagatgctggtcgcgaaggcgaaggtatggtcttcaaggatgcg
gatgaagctgttatggcttaccgcaatggctatgttcacttgcatacccgtgttggtatc
gcaacggatagcttggacaaaccatggaaagacaaccaaaagcacaagattatgatgaca
actgtcggaaaaatcttgtttaacgcgattatgcctgaaggacttccttacttacaagag
ccaaacaacgctaacttgacagaaggaactcctgataaatacttcttggaaccaggatca
gatattaaggctgctattgcagaattgccaatcaacctgccattcaagaagaaaaatctt
ggtaacatcatcgctgaaatcttcaagcgtttccgtacaactgaaacatcagcccttctt
gaccgtttgaaagacttgggttactatcactcaacacttgctggtttgacagtgggtatt
gccgatatcccagttatcgacaacaaggctgaaattattgaagaatctcacgaacgtgta
gaacaaatcaagaaacaattccgtcgtggtatgattacagacgacgagcgttacacagcg
gttacagatgagtggcgttcagctaaggaaaaattggaaaaacgcctggttgaaaaacaa
gatcctaagaacccaatcgttatgatgatggactctggtgcccgtggtaacatctccaac
ttctcccagttggccggtatgcgtggtctgatgtcagctccgaacggacgtatcatggaa
ttgccaatcttgtctaacttccgtgaaggtctttcggtattggaaatgttcttctccact
catggtgcccgtaagggtatgacggatacggccttgaagacagccgactcaggttacttg
actcgtcgtttggttgacgttgcccaagacgttattatccgtgaagacgactgtggaaca
gaccgtggtcttgacatccgttcaatcacagatggcaaggaaatgatcgagccacttgaa
gagcgtttgcaaggtcgttacactaagaaaactgttaaacatcctgaaacgggtgccgtt
atcatcggtccaaaccaattgattaccgaagacattgctcgtgaaattgtcaatgccggt
gttgaacaagtcactatccgtagcgtatttacatgtaacactcgtcacggtgtctgccgt
cattgttacggtatcaacttggcgacaggtgatgcggttgaagtgggtgaagcagttggt
acaatcgctgcccaatcgatcggtgagcctggtacacagcttacaatgcgtaccttccac
acgggtggtgtagcctcaaacagcgatatcacgcagggtcttcctcgtgtccaagagatc
tttgaagctcgcaatccgaaaggggaagcggttatcactgaggtcaaaggtgaagttaca
gccatcgaagaagatgcagcaactcgtaccaagaaagtctttgttaaaggtaaaactggc
gaaggcgaatatgtggttccatttacagcccgtatgaaggttgaagttggtgaccaagtt
gcgcgtggagcagctcttaccgaaggttctattcaaccaaaacacttgcttgaagtccgt
gatgtcttggcggttgaaacttacctactttctgaagttcaaaaagtttaccgtagccag
ggtgtagaaatcggcgacaagcacatcgaggtaatggttcgtcaaatgcttcgtaaagtt
cgtgtcatggatccaggagacacagatcttctcatgggtaccctcatggatatcacagac
tttacagatgccaatgctgaagtggtgattgctggtggtatcccagcaacagctcgtcca
gttcttatgggtatcactaaggcttcccttgaaaccaactcattcttgtctgccgcatcc
ttccaggaaacaacacgtgtccttacagatgctgctattcgtggtaaacgtgacaacctt
ctcggtcttaaagagaacgttattatcggtaagattatcccagcaggtactggtatggcc
cgctaccgtaatcttgaaccacaagccatcaatgaagttgaaatcattgaagacacagtg
gctgaagagcttgctgcagaagcaaatctcgaagctgtaactgaataa
DBGET
integrated database retrieval system
