Streptococcus iners: PW252_05375
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Entry
PW252_05375 CDS
T10964
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sins Streptococcus iners
Brite
KEGG Orthology (KO) [BR:
sins00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sins03032
]
PW252_05375 (topA)
03400 DNA repair and recombination proteins [BR:
sins03400
]
PW252_05375 (topA)
Enzymes [BR:
sins01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PW252_05375 (topA)
DNA replication proteins [BR:
sins03032
]
Prokaryotic type
DNA Topoisomerases
PW252_05375 (topA)
DNA repair and recombination proteins [BR:
sins03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PW252_05375 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
phage_tail_N
NtdA_N
HypA
Motif
Other DBs
NCBI-ProteinID:
WNY52075
UniProt:
A0AA96VLI5
LinkDB
All DBs
Position
1068219..1070312
Genome browser
AA seq
697 aa
AA seq
DB search
MATKSVSKKKTVSKKNLVIVESPAKAKTIEKYLGKNYKVVASVGHIRDLKKSSMSIDFDN
DYAPEYINIRGKGPLINSLKKEAKNAKQVYLASDPDREGEAISWHLAHILGLDEKDKNRV
VFNEITKDAVKNAFKEPRAINHDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQ
SVALKLIIDRENEINNFKPEEYWTIDATFKKGTKKFQASFYGLDGKKVKAENNEQVKEIL
GRLKGDDFLVEQVERKERKRNAPLPYTTSTMQMDAANKINFRTRKTMMVAQQLYEGVSLG
TGGTQGLITYMRTDSTRISPVAQAQAAGFITERFGEKYSKHGSKVKNATGAQDAHEAIRP
SNVQLTPESIAKYLDKDQLRLYTLIWNRFVASQMAAAVFDTMSVRLGQNGVIFAANGSQV
KFDGYMAVYNDSDKNKMLPDMEQGDTVVRTSTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPDIVNVKFTAEMEQKLDD
VEIGKEQWQKVIDGFYQPFKVELSKAEDQMEKIQIKDEPAGFDCEVCGHEMVIKLGRFGK
FYACSNFPDCRNTKQITKEIGVTCPVCQQGQVIERKSKRNRLFYGCDRYPECEFTSWDKP
VGRACPKCDHYLVEKKVRGGGKQVVCPNGDYEEDKIK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaatcagttagtaagaaaaaaacagtaagtaagaaaaatcttgttattgta
gagtcgcctgcaaaggcaaagaccatcgagaagtatcttggtaaaaattataaggttgtt
gcctcagtcggacacattcgtgatttgaaaaaatccagtatgtctattgactttgataat
gactatgcgccagagtatatcaatatccgtggtaaaggtccgcttatcaattctttgaag
aaagaggcgaaaaatgccaagcaagtctacctggcaagtgacccggaccgtgaaggagaa
gcgatttcttggcatctggctcatattttaggattagatgaaaaggataaaaaccgggtt
gttttcaatgaaatcaccaaggatgctgtaaaaaatgccttcaaggaaccacgcgctatc
aatcatgacttggttgatgcccagcaggctcgtcgtgtcttagaccgtatcgttggatat
tcgatttcacccattctctggaagaaagtcaaaaaaggcttgtcagcagggcgagtacaa
tccgttgccctcaagctcatcattgaccgtgaaaatgaaatcaacaatttcaaaccagag
gaatattggacaattgatgccacctttaaaaaggggacaaagaaattccaagcaagtttc
tatggactagatggcaaaaaagttaaggctgaaaacaatgagcaggtcaaagaaatttta
ggacgcttaaagggtgacgatttcttagttgaacaggtggagcgtaaggaacgcaagcga
aatgccccactaccttatacaacctcgaccatgcagatggatgcggctaataaaatcaac
ttccgtacccgtaaaaccatgatggttgcccaacagctttatgaaggggttagtcttggt
acaggcggtacccaaggtttgattacctatatgcgtacggattctacccgtatcagtcca
gttgctcaggctcaggcagcggggtttatcacagaacgttttggagaaaagtattccaaa
catggtagcaaggttaaaaatgcgacaggtgcccaagatgcccacgaagccattcgccct
tcaaatgttcaattgacaccggaatccattgccaaatatttggataaggatcaacttcgt
ctgtatactttgatttggaatcgttttgtggctagtcagatggctgcagcggtctttgat
accatgagtgttcgtctaggtcaaaatggagtgatttttgctgccaatggtagccaagtt
aaatttgatggttatatggctgtctataatgattctgataagaataagatgttgccagat
atggagcaaggcgatacagttgtacgcacatcaacaaatcctgaacaacattttacacag
ccgcctgctcgctattcggaagcaactttgattaagactttggaagaaaatggtgtaggg
cgtccgtcaacctatgctccaaccattgaaaccattcagaaacgctattatgttaagctt
gctgctaagcgtttcgaaccgactgagcttggtgagattgtcaacaaactcattgtcgaa
tttttccctgatatcgtcaatgtcaagtttacggctgaaatggagcaaaaactagatgat
gttgagatcggaaaagagcagtggcagaaggtcatcgatggattttaccaaccatttaag
gtagaactgtctaaagcagaagaccagatggaaaaaatccaaatcaaagatgaaccagct
ggatttgattgtgaagtttgtggacacgaaatggttattaaactaggtcgttttggaaaa
ttctatgcttgtagtaatttccctgattgccgcaacaccaaacaaattaccaaagaaatc
ggcgtgacttgcccagtgtgtcaacaaggccaggtcattgaacgtaagagcaaacgcaat
cgtttattttatggttgtgaccgttatccagaatgtgaatttacttcatgggataagccg
gttggtcgtgcctgtcccaaatgtgaccactatctcgttgagaaaaaagtccgtggtggt
ggtaaacaagttgtctgtccgaatggtgactatgaggaagataaaattaaataa
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