Streptococcus iners: PW252_07980
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Entry
PW252_07980 CDS
T10964
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sins Streptococcus iners
Pathway
sins03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sins00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PW252_07980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sins03019
]
PW252_07980
Messenger RNA biogenesis [BR:
sins03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PW252_07980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
BHD_3
Motif
Other DBs
NCBI-ProteinID:
WNY50505
UniProt:
A0AA96VZ09
LinkDB
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Position
complement(1636292..1637953)
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AA seq
553 aa
AA seq
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MSSIKIMALGGVRENGKNLYIAEVNEHIFVMDAGAKYPENEQLGVDVVVPNFDYLEENKH
RVAGVFLTHGHADSIGALPYLLEKVKVPVFGSHLTIELAKLIVKNNNATKKFKDFHVINA
ATEIDFGDSVVSFFKTTHSIPESLGIVVKTDQGNIVYTGDFKFDQAADKYYRTDFGRLAE
IGSEGVLALLSDSANADSNVQSASMHEAGEEILNTIADCEGRVIVAAVASNIVRIQQIFD
AAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERLLVKPKDMGKYEDHELIILETGRMG
EPLNGLRKMAIGRHRYVEIKEGDLVYIVTTPSVSKEAVVARVENLIYKAGGTVKSITKNL
RVSGHGNARDLQLMLNILRPKYLFPVQGEYRQLDAHAKAALEIGMFPENIIIVKRGDVMA
YEDGDFVHSGAVPAGDVMIDGNAMGDVGNIVLRDRKILSEDGIFIVAITVNRREKKIISK
AKVNTRGFVYVKKSKDILREASDLVNATVENYFTKDSFDWTELKSAVRDDLAKFLFDQTK
RRPAILPVIMEVK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcataaaaatcatggctctcggtggtgtacgtgaaaatggtaaaaacctctac
attgccgaagtaaatgagcatatttttgtcatggatgctggtgccaagtatccagaaaat
gaacagttgggtgttgatgtagttgttcccaactttgattacttggaagaaaacaagcac
cgtgtagctggggtctttttgacacatggtcacgctgattcgattggagccttgccttat
cttttagaaaaagtgaaagttcctgtttttggctcacacctgaccattgaattggcgaaa
ttgattgtcaagaacaataatgcaactaagaaattcaaggatttccacgtcatcaatgca
gcgactgagattgattttggtgattcagttgtatctttctttaagacaactcactctatt
ccggagagtttgggaattgtagtcaagacagaccaaggaaacatcgtttatactggtgac
ttcaaatttgatcaggctgcggataagtactaccggacagactttggtcgtctggctgag
attggttcagaaggggtattggctctcttatctgattctgccaatgcagatagcaatgtg
cagtcagctagtatgcatgaagctggggaagaaattctcaataccattgcagactgtgaa
ggtcgtgtgattgtagctgctgtggcaagtaacattgtccgtatccagcaaatctttgat
gcggcagaggctacaggtcgccgtgttgttttgacggggcacgatgtggaaaatattgtc
cgtaccgctatccaattgaaaaaacttcgattggttagtgagcgacttttggtcaagcca
aaggatatgggcaaatacgaagaccatgaattgattatcctggaaacaggccgtatgggg
gaacccttgaacgggcttcgtaagatggccattggtcgccaccgttatgttgaaatcaag
gaaggtgatctggtttacatcgttacgacaccaagtgtttctaaagaagcagtcgttgcc
cgtgttgaaaacttgatttacaaggctggtggaacggtcaaatccattaccaaaaacctg
cgtgtgtctggtcacggcaatgcgcgtgatttgcagctcatgctcaatatcctccgtcct
aagtatctcttcccagttcaaggggagtatcgtcagctagatgcccatgccaaagctgcg
cttgagatcggcatgttcccagagaatattattatcgtcaagcgtggggatgtcatggct
tatgaagatggggattttgtccatagcggagcggttcctgctggtgatgtcatgattgac
ggaaatgccatgggagatgttggaaatattgtccttcgtgaccgtaaaatcctctcagaa
gatggtatctttatcgtggcaatcactgtcaaccgccgtgagaagaaaatcatttccaag
gccaaggtcaatacgcgtggatttgtctatgtcaagaagagcaaggatatcttgcgtgag
gcatcagatttggttaatgcaacggtggaaaattacttcaccaaggatagttttgattgg
acagaactcaagagtgctgttcgcgatgacttagctaaattcctctttgatcaaaccaaa
cgtcgcccagcaattttgccggtgattatggaagtaaaataa
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