Sellimonas intestinalis: K5I26_03350
Help
Entry
K5I26_03350 CDS
T08070
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sint
Sellimonas intestinalis
Pathway
sint03030
DNA replication
sint03430
Mismatch repair
sint03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5I26_03350 (holB)
03430 Mismatch repair
K5I26_03350 (holB)
03440 Homologous recombination
K5I26_03350 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sint03032
]
K5I26_03350 (holB)
03400 DNA repair and recombination proteins [BR:
sint03400
]
K5I26_03350 (holB)
Enzymes [BR:
sint01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5I26_03350 (holB)
DNA replication proteins [BR:
sint03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5I26_03350 (holB)
DNA repair and recombination proteins [BR:
sint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5I26_03350 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
NACHT
DAP3
iSTAND
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
UOX63138
LinkDB
All DBs
Position
complement(696142..697131)
Genome browser
AA seq
329 aa
AA seq
DB search
MTGFKDVVGRKDLVSYIQKAVTQKQISHAYILNGERGSGKKMFAQLFAMTLQCERGGAEP
CNECHSCRQALSGNHPDIIRVVHEKPNTISVEEVRVQINNDIMIRPYNGKYKIYIVPDAD
MMTVQAQNALLKTIEEPPEYAVIFLLTENAESLLPTILSRCVMLKIKNVKDALIKKYLME
QMQIPDYKADVCTAFAQGNMGRAIMLATSEHFNEIKEETLQMMKYIKDMELPELLKALKS
LSSYKVEVDDILDLISVWYRDVLLYKATKDINGVIFSDQMKYIKESANTSSYEGIETILK
ALEKAKTRLKANVNFELVMELLLLTIKEN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgggatttaaagatgttgttggacgtaaggatttagtatcctatattcagaaagcc
gttactcagaaacagatttctcacgcctatattttaaatggggagcgcggatccgggaaa
aagatgtttgcacaattatttgcgatgacgcttcagtgcgaacgcggaggggcggagcct
tgtaatgaatgtcattcctgccgtcaggcgctttctggcaatcatccggatatcatccgg
gtggtgcatgagaagccgaatacaatcagcgtagaagaggtgcgtgtgcagatcaataat
gatattatgatccggccgtacaatggaaaatataagatctacattgtaccggatgcggac
atgatgacggtacaggcacagaatgcattgctcaagacgattgaggaaccgccggagtat
gcggtgatttttcttcttacggaaaatgcagaaagtcttttgcctacgattttgtccaga
tgtgtaatgctaaagatcaaaaatgtaaaagatgcgctcataaagaagtatctgatggag
cagatgcagataccggattacaaagcggatgtctgcaccgcctttgcccagggtaatatg
ggaagggcaattatgctggctacatcggagcattttaatgagatcaaggaagagacgctc
cagatgatgaagtatatcaaggacatggagcttccggagcttttaaaggcgctcaagagt
ctttcctcttataaagtggaagtggatgatattctggacctgatcagtgtatggtaccgg
gacgttttgctttataaggcaacgaaggatatcaatggcgtgattttctcggatcagatg
aaatatatcaaagaaagtgccaatacaagctcttacgaggggatcgagacaatccttaag
gcactggaaaaggcgaagacaaggctgaaagcaaatgtcaactttgagctggtgatggag
cttttgctattgacgataaaggagaactag
DBGET
integrated database retrieval system
