Sellimonas intestinalis: K5I26_07360
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Entry
K5I26_07360 CDS
T08070
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sint
Sellimonas intestinalis
Brite
KEGG Orthology (KO) [BR:
sint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sint03400
]
K5I26_07360 (addA)
Enzymes [BR:
sint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5I26_07360 (addA)
DNA repair and recombination proteins [BR:
sint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K5I26_07360 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UOX63847
LinkDB
All DBs
Position
1541877..1545458
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AA seq
1193 aa
AA seq
DB search
MGWTTEQEQVIAARNCNLLVSAAAGSGKTAVLVERIITRLTEGEDPLNVDQLLVVTFTEA
AAAEMKERIRGAIEKKLEEEPENFHLQRQATLIHHARITTIHSFCLSVVRDYFHTIDLEP
GFRTMEEGERKLLMQEVMEELLEEEYRKGEVSFTDFVEMAATGRDDRKVEELILNLYEFS
RSNPDPETWLCDSIQSYEEAENQPWDSLPFVKLALEQTWASLEDLEQSLVYAKSVCEDTD
GPAAYEAAIVSDIERIRKLHKAESFQKLQEALSGLSFDRLATNRDQSVSEEKIQTVKSLR
DQVKKELTSIRDQFFYETVEELRGDLRRAKPFVQELVRLTVAFGQAFEAKKQSQGVIDFG
DMEQYALRILRKEEIAEEYRNKYEEIMIDEYQDSNLIQETLLTQISRVNRGKYNVFMVGD
VKQSIYRFRLSRPELFMEKYETYGIEADGPKRRIDLHKNFRSRREVLDAVNYLFYQIMTK
ALGRVEYDEQAALYVGARFEEKPGFDTEVLLIEEGDSLESKELEARAVAARIKELKAGMV
IFDKESGTCRSVAYRDIVILLRSLKGWTDIFSNVLNEEGIPTFCGTKEGYFQTREISLLL
DYLKILDNEKQDLPLTAVLASCFGGLTSEELARIRCAYPQGPFYQAAMDYARERKDPKLC
AFFAQVHAFRKQVPYTAIHELLETIVSVTGYRDYVLALPGGVQRRANLDMLIEKAKAYES
TSYKGLFHFLRYVEQLRKYQVDYGEANTSDEMGDAVRLMSIHKSKGLEFPVVIVAGMGKR
FNTQDIHSQMVIHQDLGIGVDAVYLKERMQAPTFLKKMIQNETRLENLGEELRVLYVALT
RAKEKLILTGTLKSVEEKRKQYDRIRSQTGRPLAFGLLQKAASYLDFLVPALMRLEQDHA
KGAYPPIQVEVLTEEEILMESVIEEERRQIRREDIEAIDPDNVYDSKVHDHLRESWLFRY
PYEEQSHWSRKFSVSELKRAAYEPQTEEESGTRLYEKPLYEKSDEEIVPKFRRSQDETDI
SGAARGTVYHRILELLDYSCSYTRETLKAAIQRFVEDAKIDSVSVQSVNPDDLWHFLQSD
CASRMQKAALSGKLRKEQPFVLGVEAGRVYPEADPEGKEELLIVQGMIDLFFEEDGEIVL
LDYKTDWVHNEEELVKRYQIQLDYYQEALEKSLGKRVKERLIYSFALGREIRA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgggatggacaacagaacaagaacaggttattgcggcaagaaactgcaatcttctcgtt
tcagcagcggcgggttccggcaagacggccgttttagtggagcggatcatcaccagactg
actgagggagaagatccacttaacgtagatcagctcctggttgtaacgtttactgaggcg
gcggcggcagagatgaaagagcggatccggggagccatcgaaaagaagctggaggaggag
ccggaaaattttcacctgcagcggcaggcaaccttgattcatcatgccagaattacgacg
atccacagcttctgtctctcggtcgtccgagattactttcatactatcgatctggaacca
ggatttcggacgatggaggagggagaacgaaagcttttgatgcaggaggtgatggaagaa
cttctcgaggaagagtataggaaaggggaggtgtcattcacggattttgtggaaatggct
gccaccggaagagacgatagaaaagtagaagagctgattttaaatctgtacgagttttcc
agaagtaatccggatccggaaacgtggctttgcgacagtatccaaagttatgaggaggca
gaaaatcagccgtgggattcgcttccttttgtaaaactggcgttggagcagacatgggca
tccctggaggatctggagcagtctctcgtctatgcgaagtctgtctgtgaagacacagat
ggtccggcggcgtatgaagcagccattgtttcggatattgagaggattcgcaagcttcat
aaggcagagagttttcagaaacttcaggaggcactttccgggctttcctttgaccgtctg
gcgacaaaccgggatcaatccgtctccgaggaaaagatacagacagtgaaatctctgcgg
gatcaggtgaagaaagagctgacttctatcagagatcagttcttctatgagacagtggaa
gagctaaggggagatctaagacgcgccaagccttttgtccaggaactggtgcgcctgacg
gtggcgttcggtcaggcgttcgaggcaaagaagcaaagccagggtgtgatagactttggc
gatatggaacaatacgctcttcggattttgcgaaaagaagagatcgctgaggaataccgg
aacaaatatgaagagattatgattgacgagtatcaggacagtaatctcatccaggaaact
ctgctcacacaaatttcgcgggtgaacaggggaaaatataatgtgtttatggtcggagat
gtgaaacagagtatctatcgtttccgcctttcaaggccggagctgttcatggaaaagtat
gaaacgtatgggatagaagcagatggtcccaaacggagaatcgacctgcacaagaacttc
cggagcagaagggaagtcctggatgccgtaaactatctgttttatcagattatgacaaag
gcgctcggacgggtagaatatgatgaacaggctgccctttacgtaggagcccggtttgag
gagaagcccggatttgacacggaagttcttctgatcgaggagggggactccttggagtca
aaggagctggaggcgagggcagtagcggcccgtattaaggagcttaaagccgggatggtg
atttttgataaggaaagtggaacatgccggagcgtggcgtatcgtgacatcgtgatttta
cttcgtagtctcaagggttggaccgacattttttcaaacgtgctcaacgaagaggggatt
cccacattctgtgggacaaaggaggggtattttcagacaagggagatcagtctgctctta
gattacctgaaaattttggataatgaaaagcaggatctgccgttgacggcagtactcgcc
tcctgcttcggaggtttgacaagcgaagagctggcgcggatccggtgcgcttatccacag
ggaccgttctaccaggcggcaatggactatgccagggaaaggaaggatccgaagctttgc
gctttttttgcacaggttcatgcgtttcggaaacaggtgccgtatacggcgatccatgaa
ctattggagacgattgtctctgtgaccggataccgggactatgtactggctctgccggga
ggcgtacaaagaagagcaaatctggatatgctgattgaaaaggcgaaggcctacgagagc
accagctacaaaggactgtttcatttccttcgctatgtagagcagctccggaaataccag
gtggattacggcgaggccaacacaagcgatgagatgggggacgctgtacgtctgatgagt
attcacaaaagtaaaggactggaattcccggttgtgatcgttgccggaatgggaaagagg
tttaatacccaggatattcacagtcagatggtgattcatcaggatctggggatcggggta
gacgctgtttatttaaaagaacggatgcaggctccaacctttctgaagaaaatgatccag
aatgagacaagattggaaaatctcggagaggagcttcgggtactctatgttgcgcttaca
agagcaaaggaaaagctgatccttacaggaacactgaaaagtgtggaggaaaagagaaag
cagtacgaccggatccggtctcagacggggcgtccgctcgcttttggtctgctccagaag
gctgcaagctatctggattttcttgttccggcactgatgaggctggaacaagaccacgca
aagggagcgtatccgccgatccaagtggaagttttgacagaagaagagatcttgatggag
tcggtgatagaagaagagcggcggcagattcgaagggaggatatcgaagcgatcgatccg
gacaacgtgtacgattcgaaggttcacgatcatctgagagaaagttggctgttccggtac
ccgtacgaggagcagagccactggagcaggaaattctccgtgtctgagctgaaacgggcg
gcctacgaaccacagacggaggaagagagtggaacgagactttacgaaaaaccgctctat
gaaaaatcagatgaagagattgtacctaaatttcgcaggagccaggacgagacagacatc
agcggtgcggcacggggaacggtctatcacaggatcctggaacttctggattattcctgc
tcttatacaagggagacgttaaaggctgccattcagagatttgtggaagacgcaaagatc
gacagcgtgtccgtacagtcggtgaatccggacgatctctggcattttcttcagtcggac
tgcgcctcaaggatgcaaaaagcggcactttccgggaagctcagaaaagaacagcctttc
gttcttggtgtggaggcaggacgtgtttacccggaagcagatccggaggggaaggaggaa
cttctgatcgtgcagggaatgatcgacctgttttttgaggaagacggggagattgtcctt
ttggactataagacagattgggtgcacaatgaggaggagctggtaaagcgctatcaaatc
cagcttgactattatcaggaggctctcgaaaagagccttggaaaacgagtgaaagaaaga
ctgatctattcctttgcacttggcagagagatcagagcatag
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