Sellimonas intestinalis: K5I26_10275
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Entry
K5I26_10275 CDS
T08070
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sint
Sellimonas intestinalis
Pathway
sint02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sint00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K5I26_10275 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sint03021
]
K5I26_10275 (rpoD)
Transcription machinery [BR:
sint03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K5I26_10275 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UOX61596
LinkDB
All DBs
Position
2130833..2131951
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AA seq
372 aa
AA seq
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MEENVAKFEEKLKELVELGKKKKKVLEIQEISDFLSDLELSPEQMEKVYEYLEAMNIDVL
RIGSDDDLDADIDDLILAEEEEEVDMEKIDLSVPDGISIEDPVRMYLKEIGKVPLLSAEE
EIDLARRMSEGDESAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFD
YQKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPLP
EEIAKELDMPVDRVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPAEAAAATLL
KEQLNEVLDTLTDREQKVLRLRFGMNDGRARTLEEVGKEFDVTRERIRQIEAKALRKLRH
PSRSRKLRDYLD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacgtagcaaaatttgaggaaaagctgaaagagctggtcgaacttgggaag
aagaaaaagaaagttctcgaaattcaggagatcagcgattttctgtccgatctggaatta
tctccggagcagatggaaaaagtatatgaatatctggaagcgatgaatatcgatgtgctg
cgtatcggaagtgatgacgacctggacgcagatatagatgacctgattcttgcggaagaa
gaggaagaagtcgatatggagaaaatcgatctgtctgtgccggacggaatcagtattgag
gatccggtgcgtatgtacttaaaagagatcggaaaggtaccgcttttaagtgcagaggag
gagatcgatcttgccagaaggatgtctgaaggcgatgagagcgccaagaagagactggcc
gaggccaatctccgtcttgttgtcagtattgccaagcggtatgtaggtcgtgggatgctc
ttcttggatctgatccaggaaggaaacttagggctgatcaaggcggtagagaagtttgat
tatcagaaaggatttaagttcagtacctatgcgacctggtggatccgtcaggctatcacc
agagccattgcggatcaggcaaggacgatccggatcccggtccatatggtagagacgatc
aacaagctcatccgggtatccaggcagcttttgcaggagcttggaagggagccgcttccg
gaggagatcgcaaaggaactggatatgccggtagaccgtgtcagggagatcctgaagatt
tcccaggagccggtttctctggagacgccgattggcgaggaggaggatagtcatttagga
gacttcatccaggacgacaatgtgccggttcctgctgaggctgctgctgcaaccctctta
aaagagcagctaaatgaggtgcttgacactttgactgacagggagcagaaagttctgaga
ctacgttttggaatgaatgacgggcgggcaagaacgctggaagaggtcggcaaggaattc
gacgttacaagagagcgtatccgtcagatcgaggcgaaagcacttcggaagcttcgacat
ccaagccgcagccggaagttaagagactacctggattag
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