Sellimonas intestinalis: K5I26_12340
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Entry
K5I26_12340 CDS
T08070
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sint
Sellimonas intestinalis
Pathway
sint03420
Nucleotide excision repair
sint03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5I26_12340
03430 Mismatch repair
K5I26_12340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sint03400
]
K5I26_12340
Enzymes [BR:
sint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5I26_12340
DNA repair and recombination proteins [BR:
sint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5I26_12340
MMR (mismatch excision repair)
Other MMR factors
K5I26_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
DEAD
nSTAND3
ResIII
AAA_22
SLFN-g3_helicase
NACHT
PhoH
AAA_30
UvrD_C
AAA_16
DUF6818
AAA_11
NPHP3_N
SMC_N
BMFP
Motif
Other DBs
NCBI-ProteinID:
UOX64017
LinkDB
All DBs
Position
complement(2530500..2532509)
Genome browser
AA seq
669 aa
AA seq
DB search
MKFLEEIVRKLKRKIVQMDQEILAGQKDIESMHEYYWENYTEMDQYGYEDYDNQQALLQR
INANQDTLRLRSRYKKMLDSPFFGRVDFRYDGDDEPEIFYIGIGNFAEEAGRIPLIYDWR
APVSALFYDFDKGEASYEAPAGRMCGEIEAKWQYKIRRGKMVYGFESDVKIDDEILKQEF
GSNSDIQLKNIVRTIQKEQNAIIRNTKDKILVIQGAAGSGKTSVALHRIAYLLYHDRKNL
KSSGVLVLSPNSVFSDYISHILPELGEENIREMSLDLFAYRELKSAVPDCEDRYHQIEKN
IAGIKEDDLSRYRFKQSKELIGAVEGFMAQMEEWLVNLKGIYFRGMEKTEEEMIRLFYFK
FQDVPVLARMDAVIEYVVDEYETRYSMTLSEEDVEKLRTRFQAMYTTTDLYRIYNWFLEE
QHFPKLPEVPYDRRYLEYEDVFPMLYLKYRLLGVGRQDQIQHLVVDEMQDYSYLQYTILG
LLFQCPMTILGDRSQTMEEKQNDVTRFLPQILGKQLRKIEMNKSYRNTVEIAEYARTLVG
MDDAELLNRHGKAVAEREYGSKEEMISHILEHVKIGPEGYETAAVLTMTEAEAREWYEMI
RKKTDQVHYIDRDSSRFGRGLTVTTFYMAKGLEFDQVFTVAHKEETKMTRQAEYICATRA
LHELEVCRI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttagaagagatcgtgcgaaagctgaaaaggaaaatcgtccagatggatcag
gagattcttgccggacagaaagatatcgagagtatgcatgagtactactgggagaattat
acggagatggaccagtatgggtacgaggactacgataaccagcaggcactgctccagcgt
atcaatgccaatcaggatactttgcgcctccggtcacgttataagaagatgctcgattcg
ccgtttttcggaagagtagattttcgctacgatggagatgatgaaccggaaattttctac
atcggaatcgggaattttgccgaggaggctggcaggattccgctgatttatgattggaga
gcgccggtaagtgctctgttctatgactttgacaaaggagaggcgtcttacgaggctccg
gcaggtcggatgtgcggggaaatcgaagcgaaatggcagtacaagatccgtagagggaag
atggtctatggatttgagagcgatgtaaagattgatgatgagattctgaaacaggaattt
ggaagcaacagcgacatacagcttaaaaacattgtccggacgattcagaaagagcaaaat
gcaattatccgtaatacaaaggataaaattcttgtaattcagggagcagcgggaagtggg
aagacatcggtggcacttcacagaattgcctatctgctttatcacgatagaaagaatttg
aaatcgtccggtgtgcttgttctatctccgaacagtgtgttttcggattatatttcccat
atccttccggaacttggggaagagaacatccgggagatgagcctggatcttttcgcatac
cgggaactgaaatctgccgtaccggactgcgaggaccgctatcatcagatagaaaaaaac
attgccggaataaaggaagacgacttgagccgctatcgctttaaacagtcaaaagaactg
attggtgcggtcgaaggatttatggcgcagatggaggagtggctcgtcaatctgaaagga
atttatttccggggaatggaaaagactgaagaagagatgattcgtctgttttactttaaa
tttcaggatgttccggttttggctcggatggatgcagtcatagagtatgtggtggatgag
tacgagacgagatacagcatgacactttctgaggaagacgtggagaaactgcggaccagg
tttcaggcaatgtacacgactacagatctatatcggatttataattggtttttggaggaa
cagcatttcccgaaacttccagaggtaccgtatgacagacgttatctggagtacgaagat
gtttttccgatgctgtatctgaaatatcggttacttggtgtaggaagacaggatcagata
caacatctggttgtggatgagatgcaggattattcctacctgcaatatacgattctgggg
cttttatttcagtgtccgatgacaattctcggagaccgttcccagacaatggaggaaaag
caaaacgatgtgacacggttccttcctcagatactggggaaacagcttcggaagattgag
atgaacaaaagttaccggaatacagtggagattgccgaatatgcaaggacactggttggg
atggatgatgcagagcttctgaaccgccacgggaaagcggttgcagagcgggagtatgga
tctaaagaagagatgatcagtcatatcctggagcatgtcaagataggaccggaagggtat
gagacagcggcagtgcttacgatgacagaagctgaagccagagaatggtacgagatgatt
cggaagaaaacagatcaggtacactatattgatcgtgacagctccagatttgggcgtgga
ctgaccgtgacgaccttttatatggcaaaaggtctggagtttgaccaggtgtttactgtg
gcgcataaagaagagacgaaaatgacaaggcaggcagaatatatctgtgcgacaagagcg
cttcacgaactggaggtttgccgaatctga
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